RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 APOBEC3AP31941 199 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 THBS4P35443 961 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ERFP50548 548 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 TFF3Q07654 80 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 PPP1R8Q12972 351 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 KCNJ8Q15842 424 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 TIGD6Q17RP2 521 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 DCXRQ7Z4W1 244 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 CYB561A3Q8NBI2 242 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 OR51G2Q8NGK0 314 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 PP6455Q8WZ26 134 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 FOXRED1Q96CU9 486 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 C4orf45Q96LM5 186 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 CNBD2Q96M20 576 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 MICU1Q9BPX6 476 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 WNT5BQ9H1J7 359 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 RABL2AQ9UBK7 228 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ASH2LQ9UBL3 628 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ENPP5Q9UJA9 477 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 POU2F3Q9UKI9 436 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 RABL2BQ9UNT1 228 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 GSTK1Q9Y2Q3 226 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ATP23Q9Y6H3 246 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF879B4DU55 563 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 HS3ST1O14792 307 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ARL6IP5O75915 188 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF14P17017 642 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 KITLGP21583 273 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 NR4A1P22736 598 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 CX3CR1P49238 355 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 TESK1Q15569 626 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 TAB1Q15750 504 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 C11orf91Q3C1V1 193 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 YIF1BQ5BJH7 314 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 FIP1L1Q6UN15 594 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 Q6ZSR3 168 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 KRT74Q7RTS7 529 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 LRRC75A-AS1Q8N1F1 130 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 OR52I1Q8NGK6 324 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 NRG4Q8WWG1 115 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 RORBQ92753 470 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 FBXW5Q969U6 566 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SPSB4Q96A44 273 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 POM121L2Q96KW2 1035 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 TPK1Q9H3S4 243 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ACOT13Q9NPJ3 140 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 CENPMQ9NSP4 180 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SCOCQ9UIL1 159 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 HHLA2Q9UM44 414 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 LHFPL6Q9Y693 200 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SHANK1Q9Y566 2161 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 NCOA6Q14686 2063 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 IGHV2OR16-5A0A0B4J2B6 119 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 OR5B21A6NL26 309 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ANXA2P2A6NMY6 339 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 TPD52L2O43399 206 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ATE1O95260 518 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 FSTL3O95633 263 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 JUNBP17275 347 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 CRHBPP24387 322 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 UQCRFS1P47985 274 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SRP9P49458 86 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 IDH3GP51553 393 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 KLF3P57682 345 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 PPP1CBP62140 327 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SLC35A2P78381 396 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 PSG4Q00888 419 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 DYNC1I2Q13409 638 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ALKBH1Q13686 389 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 CCDC92Q53HC0 331 aaPredicted RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 C6orf52Q5T4I8 152 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 TMEM236Q5W0B7 351 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 COLCA1Q6ZS62 124 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 BPIFB6Q8NFQ5 453 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 OR11L1Q8NGX0 322 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SYNPRQ8TBG9 265 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ST7LQ8TDW4 575 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 RAB1BQ9H0U4 201 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 MRPL22Q9NWU5 206 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 ERVK13-1Q9NX77 482 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 BABAM2Q9NXR7 383 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 MRPL15Q9P015 296 aaKnown RBP4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SLC7A11Q9UPY5 501 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 SLC22A13Q9Y226 551 aa4.5□□□□□ -1.69
LRIT3-201ENST00000327908 DOCK7Q96N67 2140 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 PLSCR5A0PG75 271 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 DLGAP1O14490 977 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 GMDSO60547 372 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 CYB5AP00167 134 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 TFP02787 698 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 LCATP04180 440 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 ZNF20P17024 532 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 TNFRSF1AP19438 455 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 CCL1P22362 96 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 NAA10P41227 235 aaPredicted RBP4.49□□□□□ -1.69
LRIT3-201ENST00000327908 RUNX1T1Q06455 604 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 FMODQ06828 376 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 RIPPLY1Q0D2K3 151 aa4.49□□□□□ -1.69
LRIT3-201ENST00000327908 ST3GAL4Q11206 333 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms