RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MEGF11A6BM72 1044 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 C2CD4DB7Z1M9 353 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 D6RAR5 112 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 CDK2AP1O14519 115 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 BDKRB2P30411 391 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 CDAP32320 146 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 CSF2RBP32927 897 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 GUCA1AP43080 201 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 TOMM20Q15388 145 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF704Q6ZNC4 412 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 ANGPTL5Q86XS5 388 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 OR51E1Q8TCB6 317 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 GPX8Q8TED1 209 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 PAQR8Q8TEZ7 354 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 TSNAXQ99598 290 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 FOXQ1Q9C009 403 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 VN1R1Q9GZP7 353 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 CST11Q9H112 138 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 METTL7AQ9H8H3 244 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 LANCL2Q9NS86 450 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 RPH3AQ9Y2J0 694 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 RNF215Q9Y6U7 377 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 PCNX3Q9H6A9 2034 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 TRIOBPQ9H2D6 2365 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 AHCTF1Q8WYP5 2266 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 PHF3Q92576 2039 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 A0A0B4J2A0 478 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 DDAH2O95865 285 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 OR3A2P47893 321 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 NPY4RP50391 375 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 CLRN1P58418 232 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 TMEM244Q5VVB8 128 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 RGS7BPQ6MZT1 257 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF283Q8N7M2 679 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 PHB2Q99623 299 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 SLC25A21Q9BQT8 299 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 METTL8Q9H825 291 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 CNTD2Q9H8S5 307 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 MBD2Q9UBB5 411 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 SHPKQ9UHJ6 478 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 KLK13Q9UKR3 277 aa11.55□□□□□ -0.56
HMGCS1-201ENST00000325110 TICRRQ7Z2Z1 1910 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 VSTM2BA6NLU5 285 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 MT-ATP6P00846 226 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 ERCC1P07992 297 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 PGAM2P15259 253 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 HSD11B2P80365 405 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 IGLV3-21P80748 117 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 TMEM88Q6PEY1 159 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 MARCH1Q8TCQ1 289 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF721Q8TF20 911 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 FBXW5Q969U6 566 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 C8orf44Q96CB5 159 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 JSRP1Q96MG2 331 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 ST6GALNAC5Q9BVH7 336 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 SAV1Q9H4B6 383 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 TREM1Q9NP99 234 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 R4GMQ9 66 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 BLACEA4D250 179 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 RFPL4AA6NLU0 287 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 RFPL4AL1F8VTS6 287 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 TXNDC12O95881 172 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 ABOP16442 354 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 HNRNPKP61978 463 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 CHAF1BQ13112 559 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 CSRP2Q16527 193 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 SGCAQ16586 387 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 LRRC46Q96FV0 321 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 OR5B2Q96R09 309 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 CCNL2Q96S94 520 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 PPP4R1LQ9P1A2 415 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 MMACHCQ9Y4U1 282 aa11.54□□□□□ -0.56
HMGCS1-201ENST00000325110 A0A1W2PPC1 479 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 HMSDA8MTL9 139 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ALG1L2C9J202 215 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 PLPP3O14495 311 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 CRTAPO75718 401 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 HEXBP07686 556 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 CD96P40200 585 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 OR5M9Q8NGP3 310 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 FAM131CQ96AQ9 280 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 SLAMF6Q96DU3 332 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 S100A13Q99584 98 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 PRRT1Q99946 306 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ADAM19Q9H013 955 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 DUSP15Q9H1R2 295 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 TMEM231Q9H6L2 316 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 IGKV1D-43A0A0B4J1Z2 117 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 AGPAT2O15120 278 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 EIF4E2O60573 245 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 KNG1P01042 644 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 SFTPBP07988 381 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 HOXD4P09016 255 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF41P51814 821 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 HSF1Q00613 529 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 FGL1Q08830 312 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms