RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ZNF878C9JN71 531 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 APEX1P27695 318 aaKnown RBP13.32□□□□□ -0.28
PRPF3-201ENST00000324862 CCKARP32238 428 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 TGFBR1P36897 503 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 MAGEB1P43366 347 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 MLLT11Q13015 90 aaPredicted RBP13.32□□□□□ -0.28
PRPF3-201ENST00000324862 ELFN2Q5R3F8 820 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 MDP1Q86V88 176 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 PHC2Q8IXK0 858 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 FCGR1BQ92637 280 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 ATF6BQ99941 703 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 FRRS1LQ9P0K9 344 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 TIMM10BQ9Y5J6 103 aa13.32□□□□□ -0.28
PRPF3-201ENST00000324862 NKX2-6A6NCS4 301 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 PHYHO14832 338 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 SYNGR3O43761 229 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 CD36P16671 472 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 LSM3P62310 102 aaKnown RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 TGFBR3Q03167 851 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 NRN1LQ496H8 165 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 TMEM211Q6ICI0 200 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 FAM220AQ7Z4H9 259 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 TRMT61AQ96FX7 289 aaKnown RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 FUNDC2Q9BWH2 189 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 TRIM36Q9NQ86 728 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 GALNT8Q9NY28 637 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 B3GNT2Q9NY97 397 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 SULT1C4O75897 302 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 CCNOP22674 350 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 GRNP28799 593 aaKnown RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 RIDAP52758 137 aaKnown RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 RPS25P62851 125 aaKnown RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 TAF13Q15543 124 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 SLC36A2Q495M3 483 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 CLVS1Q8IUQ0 354 aaPredicted RBP13.31□□□□□ -0.28
PRPF3-201ENST00000324862 GALNT11Q8NCW6 608 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 TMED9Q9BVK6 235 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 OR51E2Q9H255 320 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 RNF167Q9H6Y7 350 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 JKAMPQ9P055 326 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 ZNF319Q9P2F9 582 aa13.31□□□□□ -0.28
PRPF3-201ENST00000324862 LOC100509620A0A075B734 347 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 SRSF10O75494 262 aaKnown RBP13.3□□□□□ -0.28
PRPF3-201ENST00000324862 HTR5AP47898 357 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 GBX2P52951 348 aaPredicted RBP13.3□□□□□ -0.28
PRPF3-201ENST00000324862 SH3BGRP55822 239 aaPredicted RBP13.3□□□□□ -0.28
PRPF3-201ENST00000324862 SCRN3Q0VDG4 424 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 P2RY6Q15077 328 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 GSG1Q2KHT4 349 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 WDR38Q5JTN6 314 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 YIPF6Q96EC8 236 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 KCNN2Q9H2S1 579 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 DDX28Q9NUL7 540 aaKnown RBP13.3□□□□□ -0.28
PRPF3-201ENST00000324862 TRBV2A0A0J9YWF9 115 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 TMEM269A0A1B0GVZ9 245 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 ZFPL1O95159 310 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 HSD11B1P28845 292 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 KIR3DL2P43630 455 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 PRSS12P56730 875 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 CDK5R1Q15078 307 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 PAQR4Q8N4S7 273 aaPredicted RBP13.3□□□□□ -0.28
PRPF3-201ENST00000324862 OR10AC1Q8NH08 325 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 OR1F12Q8NHA8 337 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 GHSRQ92847 366 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 PGLYRP3Q96LB9 341 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 SOX7Q9BT81 388 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 CEPT1Q9Y6K0 416 aa13.3□□□□□ -0.28
PRPF3-201ENST00000324862 CCRL2O00421 344 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 ZG16O60844 167 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 CPEP16870 476 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 IL32P24001 234 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 GADD45AP24522 165 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 SLC6A9P48067 706 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 CX3CR1P49238 355 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 IDH3GP51553 393 aaPredicted RBP13.29□□□□□ -0.28
PRPF3-201ENST00000324862 ZNF121P58317 390 aaPredicted RBP13.29□□□□□ -0.28
PRPF3-201ENST00000324862 UBE2NP61088 152 aaKnown RBP13.29□□□□□ -0.28
PRPF3-201ENST00000324862 TPBGQ13641 420 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 RAB35Q15286 201 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 OR51A4Q8NGJ6 313 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 OR2G2Q8NGZ5 317 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 ZNF75AQ96N20 296 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 PIGMQ9H3S5 423 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 FAM206AQ9NX38 181 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 SF3B6Q9Y3B4 125 aaKnown RBP13.29□□□□□ -0.28
PRPF3-201ENST00000324862 OR6C6A6NF89 314 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 A6NHS1 94 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 TACSTD2P09758 323 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 CRYGSP22914 178 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 ACSM1Q08AH1 577 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 DMKNQ6E0U4 476 aaPredicted RBP13.29□□□□□ -0.28
PRPF3-201ENST00000324862 KCTD20Q7Z5Y7 419 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 ZNF283Q8N7M2 679 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 IL17RDQ8NFM7 739 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 UFD1Q92890 307 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms