RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ARHGDIAP52565 204 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 SMIM11AP58511 58 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 ZNF154Q13106 437 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 TOP3AQ13472 1001 aaPredicted RBP11.98□□□□□ -0.49
RPP40-201ENST00000319533 FAM205BPQ63HN1 556 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 ZNF774Q6NX45 483 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 TBPL2Q6SJ96 375 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 ARL9Q6T311 187 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 RBMS3Q6XE24 437 aaKnown RBP11.98□□□□□ -0.49
RPP40-201ENST00000319533 TMPRSS11FQ6ZWK6 438 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 ARHGAP24Q8N264 748 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 SPICQ8N5J4 248 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 FAM86B1Q8N7N1 296 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 NPEPL1Q8NDH3 523 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 OR13C2Q8NGS9 318 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 C7orf34Q96L11 122 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 THTPAQ9BU02 230 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 MSL2Q9HCI7 577 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 TBCCD1Q9NVR7 557 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 ZNF69Q9UC07 566 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 INSIG2Q9Y5U4 225 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 AUP1Q9Y679 476 aa11.98□□□□□ -0.49
RPP40-201ENST00000319533 DNAJC9-AS1A6NH13 148 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 A6NIZ1 184 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 CLDN34H7C241 214 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 SBK2P0C263 348 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 KITLGP21583 273 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 MSR1P21757 451 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 CPT2P23786 658 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 RPL4P36578 427 aaKnown RBP11.97□□□□□ -0.49
RPP40-201ENST00000319533 GPR4P46093 362 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 CTXN1P60606 82 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 RAP1BP61224 184 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 RAP1AP62834 184 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 FHL1Q13642 323 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 PGM2L1Q6PCE3 622 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 Q6ZR03 302 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 TSEN54Q7Z6J9 526 aaKnown RBP11.97□□□□□ -0.49
RPP40-201ENST00000319533 KLHL36Q8N4N3 616 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 CLDN22Q8N7P3 220 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 SLC7A13Q8TCU3 470 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 ZNF48Q96MX3 618 aaPredicted RBP11.97□□□□□ -0.49
RPP40-201ENST00000319533 SIGLEC11Q96RL6 698 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 POLE4Q9NR33 117 aa11.97□□□□□ -0.49
RPP40-201ENST00000319533 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
RPP40-201ENST00000319533 RRP15Q9Y3B9 282 aaKnown RBP11.97□□□□□ -0.49
RPP40-201ENST00000319533 C12orf71A8MTZ7 269 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 TIMM8AO60220 97 aaPredicted RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 DIRAS1O95057 198 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 SCG5P05408 212 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 FABP3P05413 133 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 RNASE1P07998 156 aaKnown RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 PPIAL4GP0DN37 164 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 TNFRSF1AP19438 455 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 GSTM3P21266 225 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 GUCA1AP43080 201 aaPredicted RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 SEC61A1P61619 476 aaKnown RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 BTG1P62324 171 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 SPIBQ01892 262 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 PAX8Q06710 450 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 HNRNPA0Q13151 305 aaKnown RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 ZMYND11Q15326 602 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 ARMCX4Q5H9R4 360 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 C9orf139Q6ZV77 190 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 IGFN1Q86VF2 1251 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 BCL6BQ8N143 479 aaPredicted RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 OR52J3Q8NH60 311 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 FAM46AQ96IP4 442 aaKnown RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 DCLRE1CQ96SD1 692 aaKnown RBP11.96□□□□□ -0.49
RPP40-201ENST00000319533 ACTR3BQ9P1U1 418 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 IL19Q9UHD0 177 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 AURKCQ9UQB9 309 aa11.96□□□□□ -0.49
RPP40-201ENST00000319533 TRBV4-1A0A0J9YWV2 114 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 POM121CA8CG34 1229 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 CDC42EP2O14613 210 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 GADD45GO95257 159 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 ABHD16AO95870 558 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 SEMG1P04279 462 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 TNFSF4P23510 183 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 PAX2Q02962 417 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 ZBED5Q49AG3 693 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 HAVCR1Q96D42 359 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 DHRS1Q96LJ7 313 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 MRI1Q9BV20 369 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 C1QTNF5Q9BXJ0 243 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 MUC13Q9H3R2 512 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 POFUT1Q9H488 388 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 IL1RAPQ9NPH3 570 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 GRHPRQ9UBQ7 328 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 TMCC3Q9ULS5 477 aa11.95□□□□□ -0.5
RPP40-201ENST00000319533 PRPF19Q9UMS4 504 aaKnown RBP11.95□□□□□ -0.5
RPP40-201ENST00000319533 A0A1W2PPL8 197 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 TMEM178BH3BS89 294 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 IFNL4K9M1U5 179 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 XKRYO14609 159 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 SURF4O15260 269 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 AHCYL1O43865 530 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 NDUFB2O95178 105 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 CD14P08571 375 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 WNT2P09544 360 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms