RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SCOCQ9UIL1 159 aa13.4□□□□□ -0.26
PDLIM5-202ENST00000318007 DCHS2Q6V1P9 2916 aa13.4□□□□□ -0.26
PDLIM5-202ENST00000318007 CRYBG3Q68DQ2 2970 aa13.4□□□□□ -0.26
PDLIM5-202ENST00000318007 SYNGR3O43761 229 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 MT-ND5P03915 603 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 STOMP27105 288 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 RIDAP52758 137 aaKnown RBP13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 HGFACQ04756 655 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 SPHARQ15513 63 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 TBCEQ15813 527 aaPredicted RBP13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 NRN1LQ496H8 165 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 TMEM53Q6P2H8 277 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 ALDH16A1Q8IZ83 802 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 PAQR4Q8N4S7 273 aaPredicted RBP13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 SVOPQ8N4V2 548 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF283Q8N7M2 679 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 C1orf162Q8NEQ5 155 aaPredicted RBP13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 OR1F12Q8NHA8 337 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 ASB17Q8WXJ9 295 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 MUCL1Q96DR8 90 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 B3GNT2Q9NY97 397 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 ELOVL5Q9NYP7 299 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 NPAP1Q9NZP6 1156 aa13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 CAB39Q9Y376 341 aaPredicted RBP13.4□□□□□ -0.27
PDLIM5-202ENST00000318007 LOC100509620A0A075B734 347 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 C5orf63A6NC05 138 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 METTL15A6NJ78 407 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 PHYHO14832 338 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 CLDN14O95500 239 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 PNPP00491 289 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 ANXA2P07355 339 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 CX3CR1P49238 355 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 PLP2Q04941 152 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 EGR3Q06889 387 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 RAB35Q15286 201 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 LIPKQ5VXJ0 399 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 RORBQ92753 470 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 MRPS26Q9BYN8 205 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 INPP5EQ9NRR6 644 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 LSM2Q9Y333 95 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 SLC25A15Q9Y619 301 aa13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 SIRT4Q9Y6E7 314 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-202ENST00000318007 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 TMEM129A0AVI4 362 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 ABHD16AO95870 558 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 CELP19835 753 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 ARR3P36575 388 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 NANOS3P60323 173 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 SLC3A1Q07837 685 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 TIGD6Q17RP2 521 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 TIMM23BQ5SRD1 257 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF684Q5T5D7 378 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 SLC30A7Q8NEW0 376 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 STEAP2Q8NFT2 490 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 TMEM203Q969S6 136 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 MNTQ99583 582 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 PDCD1LG2Q9BQ51 273 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 HDHD5Q9BXW7 423 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 SLC22A13Q9Y226 551 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 TMEM269A0A1B0GVZ9 245 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 C19orf84I3L1E1 186 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 M0R135 149 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 FAM157BP0CG42 384 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 PLA2G2AP14555 144 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF121P58317 390 aaPredicted RBP13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 HIST1H3AP68431 136 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 TFF3Q07654 80 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 SPOCK1Q08629 439 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 TSTQ16762 297 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 RSPO1Q2MKA7 263 aaPredicted RBP13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 HIST2H3PS2Q5TEC6 136 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 ARL9Q6T311 187 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 HIST2H3AQ71DI3 136 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 FAM57BQ71RH2 274 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 RDH10Q8IZV5 341 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 RNASE6Q93091 150 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF799Q96GE5 643 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 MGLLQ99685 303 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 JAM3Q9BX67 310 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 HDHD2Q9H0R4 259 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 VCX3AQ9NNX9 186 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 BABAM2Q9NXR7 383 aa13.38□□□□□ -0.27
PDLIM5-202ENST00000318007 A1L4Q6 167 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 TBX1O43435 398 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 TFAP2AP05549 437 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 NR4A1P22736 598 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 APLNRP35414 380 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 GP2P55259 537 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 ROM1Q03395 351 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 SRSF1Q07955 248 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 ARMCX4Q5H9R4 360 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 XKRXQ6PP77 449 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 SYT9Q86SS6 491 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 C17orf78Q8N4C9 275 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF808Q8N4W9 903 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF485Q8NCK3 441 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 OR52N1Q8NH53 320 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 TRIM36Q9NQ86 728 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms