RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 RASD2Q96D21 266 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 FAM210AQ96ND0 272 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TAS2R8Q9NYW2 309 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 MBD2Q9UBB5 411 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 GNG12Q9UBI6 72 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TRAPPC2LQ9UL33 140 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 U3KQA8 63 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TTC28Q96AY4 2481 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 CNTRLQ7Z7A1 2325 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 DHHO43323 396 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 PPIHO43447 177 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 APOL3O95236 402 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 CSN2P05814 226 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 EPHA1P21709 976 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 ART1P52961 327 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 PLPPR5Q32ZL2 321 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 LINC00114Q6XXX2 140 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC36A1Q7Z2H8 476 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 C1orf174Q8IYL3 243 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 NKAIN3Q8N8D7 197 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 TTTY10Q9BZA0 68 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 NUP50Q9UKX7 468 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 NINQ8N4C6 2090 aa7.67□□□□□ -1.18
PDLIM5-201ENST00000317968 NOTOA8MTQ0 251 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 AHRRA9YTQ3 701 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM229AB2RXF0 380 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 CDC42EP2O14613 210 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TIAF1O95411 115 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 ASAH2BP0C7U1 165 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 GABRB1P18505 474 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 LIPAP38571 399 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 NBL1P41271 181 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 AKR1C2P52895 323 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 F2RL1P55085 397 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 NCS1P62166 190 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 IRF3Q14653 427 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 FAM209AQ5JX71 171 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TSEN54Q7Z6J9 526 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 MEX3DQ86XN8 651 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR51L1Q8NGJ5 315 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR8D4Q8NGM9 314 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SCGB1C1Q8TD33 95 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 RAB40AQ8WXH6 277 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SPIN2AQ99865 258 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SPIN2BQ9BPZ2 258 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR11A1Q9GZK7 315 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SPACA1Q9HBV2 294 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TVP23AA6NH52 213 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 RBBP9O75884 186 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 MT-CO2P00403 227 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 PPA1Q15181 289 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC25A35Q3KQZ1 300 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF573Q86YE8 665 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 NOXO1Q8NFA2 376 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR4D6Q8NGJ1 314 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 HINT2Q9BX68 163 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SYNPO2LQ9H987 977 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM100Q9NV29 134 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR2M5A3KFT3 312 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 ORC5O43913 435 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SFTPBP07988 381 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 ACTBP60709 375 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 ACTG1P63261 375 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 GGTLC2Q14390 218 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 GSG1Q2KHT4 349 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 RAB12Q6IQ22 244 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TRILQ7L0X0 811 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 DPY19L4Q7Z388 723 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 MDGA2Q7Z553 956 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 FJX1Q86VR8 437 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 FAM185AQ8N0U4 392 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM185AQ8NFB2 350 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 CMTM3Q96MX0 182 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 NKX3-1Q99801 234 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 GP6Q9HCN6 339 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 VSX1Q9NZR4 365 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR5V1Q9UGF6 321 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 TECTAO75443 2155 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 AQP7P3A6NL99 342 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF732B4DXR9 585 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 H3BSH0 61 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 CNOT4O95628 575 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 CDK2P24941 298 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 GP2P55259 537 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 AQP6Q13520 282 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 UBE2FQ969M7 185 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SMIM19Q96E16 107 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 C7orf50Q9BRJ6 194 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 GALNT9Q9HCQ5 603 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 A0A0G2JMP0 313 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 ANKRD61A6NGH8 418 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 GABRPO00591 440 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 MTCP1P56278 107 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 IKZF1Q13422 519 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 FNDC7Q5VTL7 733 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 EIF5AL1Q6IS14 154 aaKnown RBP7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 CDH24Q86UP0 819 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR4M2Q8NGB6 313 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR51A2Q8NGJ7 313 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR6Q1Q8NGQ2 317 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms