RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 APOBEC3DQ96AK3 386 aaPredicted RBP15.04■□□□□ -0
TPM1-203ENST00000317516 TSSK2Q96PF2 358 aa15.04■□□□□ -0
TPM1-203ENST00000317516 NMNAT3Q96T66 252 aa15.04■□□□□ -0
TPM1-203ENST00000317516 COQ7Q99807 217 aa15.04■□□□□ -0
TPM1-203ENST00000317516 IL19Q9UHD0 177 aa15.04■□□□□ -0
TPM1-203ENST00000317516 PCDHB10Q9UN67 800 aa15.04■□□□□ -0
TPM1-203ENST00000317516 NPTNQ9Y639 398 aa15.04■□□□□ -0
TPM1-203ENST00000317516 HIST1H1CP16403 213 aaKnown RBP15.03■□□□□ -0
TPM1-203ENST00000317516 GSSP48637 474 aa15.03■□□□□ -0
TPM1-203ENST00000317516 SRSF2Q01130 221 aaKnown RBP15.03■□□□□ -0
TPM1-203ENST00000317516 TSPAN31Q12999 210 aa15.03■□□□□ -0
TPM1-203ENST00000317516 OTPQ5XKR4 325 aa15.03■□□□□ -0
TPM1-203ENST00000317516 RPL13AP3Q6NVV1 102 aa15.03■□□□□ -0
TPM1-203ENST00000317516 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.03■□□□□ -0
TPM1-203ENST00000317516 OR6V1Q8N148 313 aa15.03■□□□□ -0
TPM1-203ENST00000317516 OR2AJ1Q8NGZ0 328 aa15.03■□□□□ -0
TPM1-203ENST00000317516 OR4K13Q8NH42 304 aa15.03■□□□□ -0
TPM1-203ENST00000317516 ZNF418Q8TF45 676 aaPredicted RBP15.03■□□□□ -0
TPM1-203ENST00000317516 G6PC2Q9NQR9 355 aa15.03■□□□□ -0
TPM1-203ENST00000317516 TMEM106BQ9NUM4 274 aa15.03■□□□□ -0
TPM1-203ENST00000317516 UBAP1Q9NZ09 502 aa15.03■□□□□ -0
TPM1-203ENST00000317516 IGLV1-36A0A0B4J1U3 117 aa15.02■□□□□ -0
TPM1-203ENST00000317516 IFNL4K9M1U5 179 aa15.02■□□□□ -0
TPM1-203ENST00000317516 DCTN6O00399 190 aa15.02■□□□□ -0
TPM1-203ENST00000317516 HLA-DQA2P01906 255 aa15.02■□□□□ -0
TPM1-203ENST00000317516 DBHP09172 617 aa15.02■□□□□ -0
TPM1-203ENST00000317516 SBK2P0C263 348 aa15.02■□□□□ -0
TPM1-203ENST00000317516 HMGA2P52926 109 aa15.02■□□□□ -0
TPM1-203ENST00000317516 GYS2P54840 703 aa15.02■□□□□ -0
TPM1-203ENST00000317516 HIST1H3AP68431 136 aa15.02■□□□□ -0
TPM1-203ENST00000317516 COX10Q12887 443 aa15.02■□□□□ -0
TPM1-203ENST00000317516 ECH1Q13011 328 aa15.02■□□□□ -0
TPM1-203ENST00000317516 HIST2H3PS2Q5TEC6 136 aa15.02■□□□□ -0
TPM1-203ENST00000317516 DCAF12L2Q5VW00 463 aa15.02■□□□□ -0
TPM1-203ENST00000317516 FBXW12Q6X9E4 464 aa15.02■□□□□ -0
TPM1-203ENST00000317516 HIST2H3AQ71DI3 136 aa15.02■□□□□ -0
TPM1-203ENST00000317516 SPICQ8N5J4 248 aa15.02■□□□□ -0
TPM1-203ENST00000317516 ATG16L2Q8NAA4 619 aa15.02■□□□□ -0
TPM1-203ENST00000317516 OR52L1Q8NGH7 329 aa15.02■□□□□ -0
TPM1-203ENST00000317516 ZNF582Q96NG8 517 aaPredicted RBP15.02■□□□□ -0
TPM1-203ENST00000317516 POFUT1Q9H488 388 aa15.02■□□□□ -0
TPM1-203ENST00000317516 RPRD1BQ9NQG5 326 aaKnown RBP15.02■□□□□ -0
TPM1-203ENST00000317516 PPP1R3CQ9UQK1 317 aa15.02■□□□□ -0
TPM1-203ENST00000317516 CUBNO60494 3623 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 SVEP1Q4LDE5 3571 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 FOXH1O75593 365 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 MEP1BQ16820 701 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 CORO6Q6QEF8 472 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 ZNF620Q6ZNG0 422 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 Q6ZR03 302 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 ZBTB46Q86UZ6 589 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 ARHGAP24Q8N264 748 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 KLHL36Q8N4N3 616 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 ZNF283Q8N7M2 679 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 SLC26A10Q8NG04 563 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 OR52E2Q8NGJ4 325 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 OR13G1Q8NGZ3 307 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 POP5Q969H6 163 aaKnown RBP15.01□□□□□ -0.01
TPM1-203ENST00000317516 PITX2Q99697 317 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 HCAR1Q9BXC0 346 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 PTTG3PQ9NZH4 202 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 ACTR3BQ9P1U1 418 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 LHFPL6Q9Y693 200 aa15.01□□□□□ -0.01
TPM1-203ENST00000317516 FBN3Q75N90 2809 aa15□□□□□ -0.01
TPM1-203ENST00000317516 B2RBV5 119 aa15□□□□□ -0.01
TPM1-203ENST00000317516 TNFRSF11BO00300 401 aa15□□□□□ -0.01
TPM1-203ENST00000317516 GPANK1O95872 356 aa15□□□□□ -0.01
TPM1-203ENST00000317516 SELEP16581 610 aa15□□□□□ -0.01
TPM1-203ENST00000317516 TMEM155Q4W5P6 130 aa15□□□□□ -0.01
TPM1-203ENST00000317516 SPRNQ5BIV9 151 aa15□□□□□ -0.01
TPM1-203ENST00000317516 PGBD2Q6P3X8 592 aa15□□□□□ -0.01
TPM1-203ENST00000317516 OR5AS1Q8N127 324 aa15□□□□□ -0.01
TPM1-203ENST00000317516 OR8G5Q8NG78 346 aa15□□□□□ -0.01
TPM1-203ENST00000317516 NANPQ8TBE9 248 aa15□□□□□ -0.01
TPM1-203ENST00000317516 ZFAND2BQ8WV99 257 aa15□□□□□ -0.01
TPM1-203ENST00000317516 ITLN1Q8WWA0 313 aa15□□□□□ -0.01
TPM1-203ENST00000317516 OR2V2Q96R30 315 aa15□□□□□ -0.01
TPM1-203ENST00000317516 TRIM15Q9C019 465 aa15□□□□□ -0.01
TPM1-203ENST00000317516 KCNG2Q9UJ96 466 aa15□□□□□ -0.01
TPM1-203ENST00000317516 PPIAL4EA0A075B759 164 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 PPIAL4CA0A0B4J2A2 164 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 OR6C68A6NDL8 312 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 PPIAL4DF5H284 164 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 IGHV2-70P01814 119 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 PPIAL4FP0DN26 164 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 ZNF823P16415 610 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 SRP9P49458 86 aaKnown RBP14.99□□□□□ -0.01
TPM1-203ENST00000317516 LCN2P80188 198 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.99□□□□□ -0.01
TPM1-203ENST00000317516 MALLQ13021 153 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 HLXQ14774 488 aaPredicted RBP14.99□□□□□ -0.01
TPM1-203ENST00000317516 SLC35F1Q5T1Q4 408 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 OR2T2Q6IF00 324 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 SLC18B1Q6NT16 456 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 CYP2R1Q6VVX0 501 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 ZNF771Q7L3S4 317 aaPredicted RBP14.99□□□□□ -0.01
TPM1-203ENST00000317516 LRRC28Q86X40 367 aaPredicted RBP14.99□□□□□ -0.01
TPM1-203ENST00000317516 SDR9C7Q8NEX9 313 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 NSL1Q96IY1 281 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 ATF6BQ99941 703 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms