RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ORC5O43913 435 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 CXCL13O43927 109 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 CLDN15P56746 228 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 TAF13Q15543 124 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 RAB11BQ15907 218 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 C2orf76Q3KRA6 126 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 LINC00696Q6ZRV3 163 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 DEFB124Q8NES8 71 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 OR2M7Q8NG81 312 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 UBASH3BQ8TF42 649 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 ADGRG7Q96K78 797 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 SF3B5Q9BWJ5 86 aaKnown RBP16.23■□□□□ 0.19
CCDC43-201ENST00000315286 FAM117AQ9C073 453 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 FOXD3Q9UJU5 478 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-201ENST00000315286 HMX3A6NHT5 357 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 PTHLHP12272 177 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 GDNFP39905 211 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 RFC3P40938 356 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 CASRP41180 1078 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 POU3F4P49335 361 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 EFNB2P52799 333 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 PSMA6P60900 246 aaKnown RBP16.23■□□□□ 0.19
CCDC43-201ENST00000315286 AIMP2Q13155 320 aaKnown RBP16.23■□□□□ 0.19
CCDC43-201ENST00000315286 OR52I2Q8NH67 350 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 ROBO4Q8WZ75 1007 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 FAM3DQ96BQ1 224 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 FGGYQ96C11 551 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 FAM173AQ9BQD7 235 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 RBM24Q9BX46 236 aaKnown RBP16.23■□□□□ 0.19
CCDC43-201ENST00000315286 KCNK15Q9H427 330 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF275Q9NSD4 429 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-201ENST00000315286 N6AMT1Q9Y5N5 214 aa16.23■□□□□ 0.19
CCDC43-201ENST00000315286 DHHO43323 396 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 SULT1B1O43704 296 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 CD37P11049 281 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 POU3F2P20265 443 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 MSR1P21757 451 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 NTF4P34130 210 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 GUCA1AP43080 201 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 GFRA1P56159 465 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 LSM6P62312 80 aaKnown RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 SPOCK1Q08629 439 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 KLF9Q13886 244 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 OR1C1Q15619 314 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 GLT8D1Q68CQ7 371 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 LUZP2Q86TE4 346 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 OR10D3Q8NH80 312 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 OR2V1Q8NHB1 315 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 SLC25A28Q96A46 364 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 NELFAQ9H3P2 528 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 CGGBP1Q9UFW8 167 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 NUFIP1Q9UHK0 495 aaKnown RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 DCDC2BA2VCK2 349 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 INMT-MINDY4F8WBC2 141 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 GABARAPH6UMI1 98 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 SYT7O43581 403 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 SLC2A1P11166 492 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 TAS2R20P59543 309 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 GLYATL3Q5SZD4 288 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 FOXL2NBQ6ZUU3 175 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 C20orf196Q8IYI0 205 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 NABP1Q96AH0 204 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 CREB3L1Q96BA8 519 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF837Q96EG3 531 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 NIPAL2Q9H841 368 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 PLEKHA1Q9HB21 404 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 ABI3Q9P2A4 366 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 CDV3Q9UKY7 258 aaKnown RBP16.22■□□□□ 0.19
CCDC43-201ENST00000315286 FLVCR1Q9Y5Y0 555 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 ALG5Q9Y673 324 aa16.22■□□□□ 0.19
CCDC43-201ENST00000315286 SPAARA0A1B0GVQ0 90 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF716A6NP11 495 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 CENPXA8MT69 81 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 A8MV72 311 aaPredicted RBP16.21■□□□□ 0.19
CCDC43-201ENST00000315286 ANOS1P23352 680 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 RAB25P57735 213 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF121P58317 390 aaPredicted RBP16.21■□□□□ 0.19
CCDC43-201ENST00000315286 ENDOGQ14249 297 aaKnown RBP16.21■□□□□ 0.19
CCDC43-201ENST00000315286 TGIF1Q15583 401 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 TBRG1Q3YBR2 411 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 BIVMQ86UB2 503 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 SULF2Q8IWU5 870 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 OR51E1Q8TCB6 317 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 INTS12Q96CB8 462 aaKnown RBP16.21■□□□□ 0.19
CCDC43-201ENST00000315286 ST6GAL2Q96JF0 529 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 IP6K3Q96PC2 410 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 MRPL15Q9P015 296 aaKnown RBP16.21■□□□□ 0.19
CCDC43-201ENST00000315286 ZNF319Q9P2F9 582 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 KLK11Q9UBX7 282 aa16.21■□□□□ 0.19
CCDC43-201ENST00000315286 LOC100289279A0A1B0GTE1 492 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 A0A1B0GTI1 187 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 MEGF11A6BM72 1044 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 TRAPPC2P0DI81 140 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 TRAPPC2BP0DI82 140 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 HLA-DMAP28067 261 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 HTR2CP28335 458 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 MNDAP41218 407 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 ATP1A1-AS1Q5TC04 95 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 ANKRD16Q6P6B7 361 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 LRRC18Q8N456 261 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms