RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SHBQ15464 509 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 NKAIN3Q8N8D7 197 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 STK35Q8TDR2 534 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 ASB4Q9Y574 426 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 KCNE3Q9Y6H6 103 aa12.21□□□□□ -0.45
RFFL-201ENST00000315249 CCL21O00585 134 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 ZIC2O95409 532 aaPredicted RBP12.21□□□□□ -0.46
RFFL-201ENST00000315249 EML2O95834 649 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 TMEM81Q6P7N7 255 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 MDGA2Q7Z553 956 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 RDH10Q8IZV5 341 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 UBAC2Q8NBM4 344 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 C19orf43Q9BQ61 176 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 C1QTNF3Q9BXJ4 246 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 SLC25A37Q9NYZ2 338 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 OSGIN1Q9UJX0 560 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 LOC107986453A0A1B0GWG9 222 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 NAP1L6A6NFF2 107 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 CDX4O14627 284 aaPredicted RBP12.21□□□□□ -0.46
RFFL-201ENST00000315249 SPDEFO95238 335 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.46
RFFL-201ENST00000315249 NRG4Q8WWG1 115 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 OR2A5Q96R48 311 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 RNF32Q9H0A6 362 aa12.21□□□□□ -0.46
RFFL-201ENST00000315249 RBBP6Q7Z6E9 1792 aaKnown RBP12.21□□□□□ -0.46
RFFL-201ENST00000315249 H3BMQ9 156 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 KLK8O60259 260 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 SUMO3P55854 103 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 SLC15A4Q8N697 577 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 OR51D1Q8NGF3 324 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 TRMT61AQ96FX7 289 aaKnown RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 NUBP2Q9Y5Y2 271 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 ATP1B1P05026 303 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 ERP29P30040 261 aaKnown RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 PBDC1Q9BVG4 233 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 FN3KRPQ9HA64 309 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 IGLV3-16A0A075B6K0 115 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 ZNF728P0DKX0 622 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 ZNF121P58317 390 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 ZNF321PQ8N8H1 164 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 KTI12Q96EK9 354 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 FOXB1Q99853 325 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 HEYLQ9NQ87 328 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 GDF2Q9UK05 429 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 RAB22AQ9UL26 194 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 LOC100289279A0A1B0GTE1 492 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 TOX3O15405 576 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 DHHO43323 396 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 IL7P13232 177 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 TBCEQ15813 527 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 ACTBL2Q562R1 376 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 IDO2Q6ZQW0 420 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 GTPBP8Q8N3Z3 284 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 KIRREL1Q96J84 757 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 OPALINQ96PE5 141 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 SLC25A31Q9H0C2 315 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 SLC23A1Q9UHI7 598 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 A0A087WUJ7 227 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 TRABD2BA6NFA1 517 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 MAGEB4O15481 346 aaPredicted RBP12.2□□□□□ -0.46
RFFL-201ENST00000315249 XRCC2O43543 280 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 SBK2P0C263 348 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 UCNP55089 124 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 OR2B11Q5JQS5 317 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 FJX1Q86VR8 437 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 SLAMF9Q96A28 289 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 BCO1Q9HAY6 547 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 A0A1B0GTL3 188 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 GLAP06280 429 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
RFFL-201ENST00000315249 ALG1L2C9J202 215 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 MSTNO14793 375 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 ACSM5Q6NUN0 579 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 DVL3Q92997 716 aaPredicted RBP12.19□□□□□ -0.46
RFFL-201ENST00000315249 NECAP2Q9NVZ3 263 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 PSORS1C1Q9UIG5 152 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 FBXO7Q9Y3I1 522 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 SOD1P00441 154 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 GPM6AP51674 278 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 ELFN2Q5R3F8 820 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 SFXN4Q6P4A7 337 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 ZNF620Q6ZNG0 422 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 NOXO1Q8NFA2 376 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 OR51H1Q8NH63 302 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 EID2BQ96D98 161 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 MAGEA5P43359 124 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 FGFBP1Q14512 234 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 LPCAT3Q6P1A2 487 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 MAFIPQ8WZ33 124 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 DOCK8Q8NF50 2099 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 NCBP2LA6PVI3 153 aaKnown RBP12.19□□□□□ -0.46
RFFL-201ENST00000315249 NAGAP17050 411 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 POU3F3P20264 500 aaPredicted RBP12.19□□□□□ -0.46
RFFL-201ENST00000315249 CD82P27701 267 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 HFEQ30201 348 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms