RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PSMB6P28072 239 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 DUSP1P28562 367 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 CSF2RBP32927 897 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 ZNF93P35789 620 aaPredicted RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 LTBRP36941 435 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 SLC19A1P41440 591 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 ARRDC2Q8TBH0 407 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 LIPHQ8WWY8 451 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 ZCCHC14Q8WYQ9 949 aaKnown RBP7.48□□□□□ -1.21
VPS41-202ENST00000310301 ADOQ96SZ5 270 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 VAMP8Q9BV40 100 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 NDUFB11Q9NX14 153 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 NPFFR2Q9Y5X5 522 aa7.48□□□□□ -1.21
VPS41-202ENST00000310301 A0A1B0GX78 115 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 MTHFD2P13995 350 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 USF1P22415 310 aaPredicted RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 AOAHP28039 575 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 TMPRSS3P57727 454 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 IL11RAQ14626 422 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 ZNF684Q5T5D7 378 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 LCN15Q6UWW0 184 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 FUNDC1Q8IVP5 155 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 OR5K2Q8NHB8 316 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 RXFP4Q8TDU9 374 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 PHYHIPQ92561 330 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 AKR1E2Q96JD6 320 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 SRRQ9GZT4 340 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 EIF4EP06730 217 aaKnown RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 PIPP12273 146 aaPredicted RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 FABP9Q0Z7S8 132 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 ENDOGQ14249 297 aaKnown RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 UBAC2Q8NBM4 344 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 OR51A2Q8NGJ7 313 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 OR5B3Q8NH48 314 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 RPUSD4Q96CM3 377 aaKnown RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 YIPF6Q96EC8 236 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 KIR3DX1Q9H7L2 352 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 CGGBP1Q9UFW8 167 aaPredicted RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 LOC102724200A0A096LPH7 203 aaPredicted RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 A0A0A6YYC8 382 aaPredicted RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 FITM1A5D6W6 292 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 I3L1I5 382 aaPredicted RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 IGLV3-25P01717 112 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 QDPRP09417 244 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 CALCBP10092 127 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 GABRA2P47869 451 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 RAB13P51153 203 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 SNRPNP63162 240 aaKnown RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 TEKQ02763 1124 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 SLC43A2Q8N370 569 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 OR1J2Q8NGS2 313 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 TSLPQ969D9 159 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 CLDN23Q96B33 292 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 BTBD17A6NE02 478 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 ST8SIA3O43173 380 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 RGS11O94810 467 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 SFTA3P0C7M3 94 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 FTH1P19P0C7X4 201 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 CPMP14384 443 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 CSRP1P21291 193 aaKnown RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 MPGP29372 298 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 SDHAP31040 664 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 NKX2-1P43699 371 aaPredicted RBP7.47□□□□□ -1.21
VPS41-202ENST00000310301 TPPP2P59282 170 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 ACKR1Q16570 336 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 TAZQ16635 292 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 CLLU1Q5K131 121 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 LIMS2Q7Z4I7 341 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 PRSS35Q8N3Z0 413 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 SCPEP1Q9HB40 452 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 CHST11Q9NPF2 352 aa7.47□□□□□ -1.21
VPS41-202ENST00000310301 TMEM129A0AVI4 362 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 AQP7O14520 342 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 C1orf105O95561 183 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 CD37P11049 281 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 HIST1H1TP22492 207 aaPredicted RBP7.46□□□□□ -1.21
VPS41-202ENST00000310301 PSMB5P28074 263 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 MEOX2P50222 304 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 GDF7Q7Z4P5 450 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 OR4N2Q8NGD1 307 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 ASB11Q8WXH4 323 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 UBXN10Q96LJ8 280 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 ATF6BQ99941 703 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 SMOC1Q9H4F8 434 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 A4GALTQ9NPC4 353 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 MBNL1Q9NR56 388 aaKnown RBP7.46□□□□□ -1.21
VPS41-202ENST00000310301 MCM3APO60318 1980 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 GJB3O75712 270 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 EDN3P14138 238 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 RPL13AP40429 203 aaKnown RBP7.46□□□□□ -1.21
VPS41-202ENST00000310301 DCAF7P61962 342 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 OR5M10Q6IEU7 315 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 GLIPR1L1Q6UWM5 242 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 USP51Q70EK9 711 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 ZNF534Q76KX8 674 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 BAP18Q8IXM2 172 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 NKAIN3Q8N8D7 197 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 OR5AP2Q8NGF4 316 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 OR14A16Q8NHC5 309 aa7.46□□□□□ -1.21
VPS41-202ENST00000310301 ZNF480Q8WV37 535 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms