RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZNF35P13682 527 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 PMPCAQ10713 525 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 EXOSC2Q13868 293 aaKnown RBP10.28□□□□□ -0.76
PTPN2-201ENST00000309660 ADGRE4PQ86SQ3 457 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 CDH24Q86UP0 819 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 GABRG1Q8N1C3 465 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 GALNT16Q8N428 558 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 POC1BQ8TC44 478 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 NPRL2Q8WTW4 380 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 CLDN23Q96B33 292 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 ADAT3Q96EY9 351 aaPredicted RBP10.28□□□□□ -0.76
PTPN2-201ENST00000309660 MRGPRX4Q96LA9 322 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 GPR137Q96N19 417 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 CNTD2Q9H8S5 307 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 B3GAT1Q9P2W7 334 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 U3KQA8 63 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 CIB4A0PJX0 185 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 TOX3O15405 576 aaPredicted RBP10.28□□□□□ -0.76
PTPN2-201ENST00000309660 SLC22A5O76082 557 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 MPC2O95563 127 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 IGHG1P01857 330 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 IGHMP01871 453 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 TPOP07202 933 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 ABOP16442 354 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 C2orf68Q2NKX9 166 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 MUC20Q8N307 709 aaPredicted RBP10.28□□□□□ -0.76
PTPN2-201ENST00000309660 TMEM156Q8N614 296 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 TTC9Q92623 222 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 EDAQ92838 391 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 PBOV1Q9GZY1 135 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 GDF2Q9UK05 429 aaPredicted RBP10.28□□□□□ -0.76
PTPN2-201ENST00000309660 RGS11O94810 467 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 TTRP02766 147 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 ZNF20P17024 532 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 ZNF24P17028 368 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 ACHEP22303 614 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 LAP3P28838 519 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 ZNF626Q68DY1 528 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.28□□□□□ -0.76
PTPN2-201ENST00000309660 NUDCD2Q8WVJ2 157 aa10.28□□□□□ -0.76
PTPN2-201ENST00000309660 CDX2Q99626 313 aaPredicted RBP10.28□□□□□ -0.76
PTPN2-201ENST00000309660 QDPRP09417 244 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 CSRP1P21291 193 aaKnown RBP10.27□□□□□ -0.76
PTPN2-201ENST00000309660 SLC6A9P48067 706 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 CLDN17P56750 224 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 ACTBP60709 375 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 ACTG1P63261 375 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 CDNFQ49AH0 187 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 OR6N1Q8NGY5 312 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 RNF133Q8WVZ7 376 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 SEH1LQ96EE3 360 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 MICU1Q9BPX6 476 aa10.27□□□□□ -0.76
PTPN2-201ENST00000309660 ZNF736B4DX44 427 aaPredicted RBP10.27□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF208O43345 1280 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 UBCP0CG48 685 aaKnown RBP10.27□□□□□ -0.77
PTPN2-201ENST00000309660 BDKRB2P30411 391 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 SUMO3P55854 103 aaPredicted RBP10.27□□□□□ -0.77
PTPN2-201ENST00000309660 RAB14P61106 215 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 RSPO4Q2I0M5 234 aaPredicted RBP10.27□□□□□ -0.77
PTPN2-201ENST00000309660 LRRC37A5PQ49AS3 106 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 SLC22A6Q4U2R8 563 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 AWAT2Q6E213 333 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 OR52W1Q6IF63 320 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 RNF144BQ7Z419 303 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 GVQW1Q8N7I0 195 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF283Q8N7M2 679 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 OR5D18Q8NGL1 313 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 GPER1Q99527 375 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 TRAF4Q9BUZ4 470 aaPredicted RBP10.27□□□□□ -0.77
PTPN2-201ENST00000309660 POFUT1Q9H488 388 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 NPDC1Q9NQX5 325 aaPredicted RBP10.27□□□□□ -0.77
PTPN2-201ENST00000309660 FBXO4Q9UKT5 387 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 MEGF11A6BM72 1044 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 TEX46H3BTG2 121 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 WDPCPO95876 746 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 F10P00742 488 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 PTGDSP41222 190 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 GUCA1AP43080 201 aaPredicted RBP10.27□□□□□ -0.77
PTPN2-201ENST00000309660 MAP2K6P52564 334 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 LIN54Q6MZP7 749 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 RTN4RL2Q86UN3 420 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 ZNF584Q8IVC4 421 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 LRRC18Q8N456 261 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 WDSUB1Q8N9V3 476 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 CLEC1AQ8NC01 280 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 OR2M3Q8NG83 312 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 NAT6Q93015 286 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 SLC25A28Q96A46 364 aa10.27□□□□□ -0.77
PTPN2-201ENST00000309660 METTL21EPA6NDL7 271 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 POM121CA8CG34 1229 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 F5H5K5 113 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 G3V3Q6 166 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 I3L521 148 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 TP53I11O14683 189 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 TMEM127O75204 238 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 LPLP06858 475 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ENPP1P22413 925 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 ZP4Q12836 540 aa10.26□□□□□ -0.77
PTPN2-201ENST00000309660 DCAF12L2Q5VW00 463 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms