RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 ADGRL4Q9HBW9 690 aa19.28■□□□□ 0.68
HOXD4-201ENST00000306324 SNTNA6NMZ2 147 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 ZNF878C9JN71 531 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 F5H5K5 113 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 H0YJX3 145 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 APOL3O95236 402 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 LCKP06239 509 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 APOBEC3AP31941 199 aaPredicted RBP19.27■□□□□ 0.67
HOXD4-201ENST00000306324 ZNF544Q6NX49 715 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 ARL9Q6T311 187 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 IZUMO2Q6UXV1 221 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 FBXL14Q8N1E6 418 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 Q96MT0 163 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 FAIMQ9NVQ4 179 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 KLHDC2Q9Y2U9 406 aa19.27■□□□□ 0.67
HOXD4-201ENST00000306324 SMPD2O60906 423 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 GNAO1P09471 354 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 SBK2P0C263 348 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 TTKP33981 857 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 GLRXP35754 106 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 MTNR1AP48039 350 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 RPS23P62266 143 aaKnown RBP19.26■□□□□ 0.67
HOXD4-201ENST00000306324 POU4F2Q12837 409 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 TMED1Q13445 227 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 IL18R1Q13478 541 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 MAD2L1BPQ15013 274 aaPredicted RBP19.26■□□□□ 0.67
HOXD4-201ENST00000306324 C6orf52Q5T4I8 152 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 PAMR1Q6UXH9 720 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 UNQ6126/PRO20091Q6UXV3 157 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 SLC35F2Q8IXU6 374 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 MUC15Q8N387 334 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 OR1J1Q8NGS3 322 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 ABHD4Q8TB40 342 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 BCL2L14Q9BZR8 327 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 ZNF442Q9H7R0 627 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 ELOVL3Q9HB03 270 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 DDX28Q9NUL7 540 aaKnown RBP19.26■□□□□ 0.67
HOXD4-201ENST00000306324 LAMP3Q9UQV4 416 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 PLEKHA6Q9Y2H5 1048 aa19.26■□□□□ 0.67
HOXD4-201ENST00000306324 PDZD2O15018 2839 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 VSTM5A8MXK1 200 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 NGFP01138 241 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 ALOX5APP20292 161 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 NUDT6P53370 316 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 RSPO1Q2MKA7 263 aaPredicted RBP19.25■□□□□ 0.67
HOXD4-201ENST00000306324 ARFGEF3Q5TH69 2177 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 RFPL4BQ6ZWI9 263 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 C8orf59Q8N0T1 100 aaPredicted RBP19.25■□□□□ 0.67
HOXD4-201ENST00000306324 TMEM171Q8WVE6 324 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 RNF133Q8WVZ7 376 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 APH1BQ8WW43 257 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 TFAP2CQ92754 450 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 SPTSSAQ969W0 71 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 RNFT2Q96EX2 444 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 DCLRE1CQ96SD1 692 aaKnown RBP19.25■□□□□ 0.67
HOXD4-201ENST00000306324 CCL19Q99731 98 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 TTTY10Q9BZA0 68 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 ST6GALNAC2Q9UJ37 374 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 FZR1Q9UM11 496 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 EDARQ9UNE0 448 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 TMEM14AQ9Y6G1 99 aa19.25■□□□□ 0.67
HOXD4-201ENST00000306324 RAF1P04049 648 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 SOD3P08294 240 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 OR4A8P0C604 315 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 DANCRP0C864 163 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 VHLP40337 213 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 SLC15A1P46059 708 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 TPTEP56180 551 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 ERVS71-1P61550 626 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 ADIPOQQ15848 244 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 RGS7BPQ6MZT1 257 aaPredicted RBP19.24■□□□□ 0.67
HOXD4-201ENST00000306324 CNIH3Q8TBE1 160 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 TBX5Q99593 518 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 AMBNQ9NP70 447 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 COPS3Q9UNS2 423 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 CMAHPQ9Y471 501 aa19.24■□□□□ 0.67
HOXD4-201ENST00000306324 M0R135 149 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 H2BFMP0C1H6 154 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 ACSM4P0C7M7 580 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 HSD11B1P28845 292 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 SERPINF1P36955 418 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 SLC6A9P48067 706 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 PRKXP51817 358 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 ISL1P61371 349 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 GRB2P62993 217 aaKnown RBP19.23■□□□□ 0.67
HOXD4-201ENST00000306324 KRTAP27-1Q3LI81 207 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 SPATA46Q5T0L3 261 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 AGAP6Q5VW22 663 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.23■□□□□ 0.67
HOXD4-201ENST00000306324 ZNF799Q96GE5 643 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 KCNJ15Q99712 375 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 TBCCD1Q9NVR7 557 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 NAV2Q8IVL1 2488 aa19.23■□□□□ 0.67
HOXD4-201ENST00000306324 ICMTO60725 284 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 WBP4O75554 376 aaKnown RBP19.22■□□□□ 0.67
HOXD4-201ENST00000306324 DBTP11182 482 aaKnown RBP19.22■□□□□ 0.67
HOXD4-201ENST00000306324 RGS6P49758 472 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 CXCR4P61073 352 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 PPP1CBP62140 327 aa19.22■□□□□ 0.67
HOXD4-201ENST00000306324 ZNF91Q05481 1191 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms