RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 KCNE3Q9Y6H6 103 aa14.46□□□□□ -0.1
USP42-201ENST00000306177 KCNE1BA0A087WTH5 132 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 ANKUB1A6NFN9 424 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 HS3ST1O14792 307 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 PIAS2O75928 621 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 RPS27P42677 84 aaKnown RBP14.45□□□□□ -0.1
USP42-201ENST00000306177 FOXF1Q12946 379 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 FZD2Q14332 565 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 SHBQ15464 509 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 KCNIP4Q6PIL6 250 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 TMEM200AQ86VY9 491 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 EGLN1Q9GZT9 426 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 FAM234AQ9H0X4 552 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 ARRDC1-AS1Q9H2J1 176 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 A0A1W2PPH5 198 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 ANKRD61A6NGH8 418 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 SHISA7A6NL88 538 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 XRCC2O43543 280 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 SERPINF1P36955 418 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 CLN3Q13286 438 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 KIAA0040Q15053 153 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 HMGN3Q15651 99 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 HLA-BQ31612 363 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 TEX19Q8NA77 164 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 PBOV1Q9GZY1 135 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 TAS2R5Q9NYW4 299 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 EXO1Q9UQ84 846 aaKnown RBP14.45□□□□□ -0.1
USP42-201ENST00000306177 SERTM1A2A2V5 107 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 CBR3O75828 277 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 TNFSF15O95150 251 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 GLAP06280 429 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 PTAFRP25105 342 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 SOX18P35713 384 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 THBS3P49746 956 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 CLDN15P56746 228 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 UBE2KP61086 200 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 KIAA1217Q5T5P2 1943 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 SPACA9Q96E40 222 aaPredicted RBP14.45□□□□□ -0.1
USP42-201ENST00000306177 TMEM9BQ9NQ34 198 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 SLC39A9Q9NUM3 307 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 IMPA2O14732 288 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 ESCO2Q56NI9 601 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 ZNF793Q6ZN11 406 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 GABRG1Q8N1C3 465 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 TMEM217Q8N7C4 229 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 PXT1Q8NFP0 134 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 SLCO1B1Q9Y6L6 691 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 TGFBR1P36897 503 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 HNF4GQ14541 408 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 NKG7Q16617 165 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 PCK2Q16822 640 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 LAIR1Q6GTX8 287 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 STAC2Q6ZMT1 411 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 OR1S2Q8NGQ3 325 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 WDR34Q96EX3 536 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 MED18Q9BUE0 208 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 NUDT9Q9BW91 350 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 CRLF2Q9HC73 371 aa14.45□□□□□ -0.1
USP42-201ENST00000306177 OR2W5A6NFC9 320 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 PRRG2O14669 202 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 EFSO43281 561 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 CD160O95971 181 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 MYF5P13349 255 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 ALOX5APP20292 161 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 CADM3Q8N126 398 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 ISG20L2Q9H9L3 353 aaKnown RBP14.44□□□□□ -0.1
USP42-201ENST00000306177 B9D1Q9UPM9 204 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 TNFSF11O14788 317 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 NRASP01111 189 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 IL2RAP01589 272 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 GIPP09681 153 aaPredicted RBP14.44□□□□□ -0.1
USP42-201ENST00000306177 EVX1P49640 407 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 WNT3P56703 355 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 SUMF1Q8NBK3 374 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 OR51A4Q8NGJ6 313 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 SLC22A13Q9Y226 551 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 A0A087WUJ7 227 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 C5orf49A4QMS7 147 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 TMEM235A6NFC5 223 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 TGM6O95932 706 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 C1QAP02745 245 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 OR10A3P58181 314 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 CMTM4Q8IZR5 234 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 HSD17B11Q8NBQ5 300 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 SLC38A9Q8NBW4 561 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 MAFAQ8NHW3 353 aaPredicted RBP14.44□□□□□ -0.1
USP42-201ENST00000306177 NANPQ8TBE9 248 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 ZC3HAV1LQ96H79 300 aaKnown RBP14.44□□□□□ -0.1
USP42-201ENST00000306177 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 LY75O60449 1722 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 NKX2-2O95096 273 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 KANSL1Q7Z3B3 1105 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 TRIB1Q96RU8 372 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 HEYLQ9NQ87 328 aaPredicted RBP14.44□□□□□ -0.1
USP42-201ENST00000306177 PROCRQ9UNN8 238 aa14.44□□□□□ -0.1
USP42-201ENST00000306177 DFFBO76075 338 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 HOXC4P09017 264 aaPredicted RBP14.43□□□□□ -0.1
USP42-201ENST00000306177 YBX1P67809 324 aaKnown RBP14.43□□□□□ -0.1
USP42-201ENST00000306177 BATF2Q8N1L9 274 aa14.43□□□□□ -0.1
USP42-201ENST00000306177 KCNIP2Q9NS61 270 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms