RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 GLSO94925 669 aaPredicted RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 ELAVL1Q15717 326 aaKnown RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 NXPE3Q969Y0 559 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 SIGLEC11Q96RL6 698 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 UBL7Q96S82 380 aaPredicted RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 SLC17A5Q9NRA2 495 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 OR5K3A6NET4 321 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 GSTP1P09211 210 aaKnown RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 CTXN2P0C2S0 81 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 FKBP2P26885 142 aaKnown RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 H3F3AP84243 136 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 MPPED2Q15777 294 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 Q6ZNB5 142 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF439Q8NDP4 499 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 SLC25A43Q8WUT9 341 aaPredicted RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 MITD1Q8WV92 249 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF845Q96IR2 970 aaPredicted RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 DUSP23Q9BVJ7 150 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 CHRNA9Q9UGM1 479 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 SLC22A13Q9Y226 551 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 BTBD17A6NE02 478 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 LEUTXA8MZ59 168 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 AKR7A3O95154 331 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 FAM199XQ6PEV8 388 aaPredicted RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 LMAN1LQ9HAT1 526 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 C12orf10Q9HB07 376 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 FGF22Q9HCT0 170 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 TBC1D29Q9UFV1 150 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 RNF150Q9ULK6 438 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 PCDHB10Q9UN67 800 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 NXPH3O95157 252 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 SLC6A1P30531 599 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 TM4SF4P48230 202 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 GPR85P60893 370 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 PRTGQ2VWP7 1150 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 BPIFCQ8NFQ6 507 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 OR52N5Q8NH56 324 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 LIPHQ8WWY8 451 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 TSLPQ969D9 159 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 ZC3HAV1LQ96H79 300 aaKnown RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 HHIPQ96QV1 700 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 HAO2Q9NYQ3 351 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 DHCR7Q9UBM7 475 aaKnown RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 BOKQ9UMX3 212 aaPredicted RBP11.68□□□□□ -0.54
COL3A1-201ENST00000304636 CYB5BO43169 146 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 CYTIPO60759 359 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 TMPRSS11FQ6ZWK6 438 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 COMMD1Q8N668 190 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 OR5AP2Q8NGF4 316 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 SLCO1C1Q9NYB5 712 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 KCNG2Q9UJ96 466 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 RNASEK-C17orf49H0YIS7 233 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 SCRG1O75711 98 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 CD1CP29017 333 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 HOXA1P49639 335 aaPredicted RBP11.67□□□□□ -0.54
COL3A1-201ENST00000304636 RBP2P50120 134 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 RNF4P78317 190 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 TMEM128Q5BJH2 165 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 CA13Q8N1Q1 262 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 GPR32P1Q8NGA4 272 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 HS3ST3A1Q9Y663 406 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 SDCBPO00560 298 aaPredicted RBP11.67□□□□□ -0.54
COL3A1-201ENST00000304636 ENPP1P22413 925 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 PPICP45877 212 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 EMDP50402 254 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 PRAMEF20Q5VT98 475 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 FBXW5Q969U6 566 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
COL3A1-201ENST00000304636 PIGQQ9BRB3 760 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 TXNIPQ9H3M7 391 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 MMP26Q9NRE1 261 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 PRAMEF25A6NGN4 478 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 GUCA2AQ02747 115 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 THEM4Q5T1C6 240 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 C1QTNF12Q5T7M4 302 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 LIMS2Q7Z4I7 341 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 OR1J1Q8NGS3 322 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 GAR1Q9NY12 217 aaKnown RBP11.67□□□□□ -0.54
COL3A1-201ENST00000304636 OBP2AQ9NY56 170 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 CD207Q9UJ71 328 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 SIPA1L3O60292 1781 aaPredicted RBP11.67□□□□□ -0.54
COL3A1-201ENST00000304636 ADAMTSL3P82987 1691 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 MPPED1O15442 326 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 OLFM2O95897 454 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 NAT1P18440 290 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 TFAP2EQ6VUC0 442 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 GCNT2Q8N0V5 402 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 OR2A1Q8NGT9 310 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 GPX8Q8TED1 209 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 NRSN2Q9GZP1 204 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 OSGIN2Q9Y236 505 aa11.67□□□□□ -0.54
COL3A1-201ENST00000304636 NME1P15531 152 aaKnown RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 CSF2RBP32927 897 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 SSR4P51571 173 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms