RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 LRFN5Q96NI6 719 aa12.99□□□□□ -0.33
CDT1-201ENST00000301019 MFNGO00587 321 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 LDB3O75112 727 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 SNAPC5O75971 98 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 CALCBP10092 127 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 GNB3P16520 340 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 DHPSP49366 369 aaPredicted RBP12.98□□□□□ -0.33
CDT1-201ENST00000301019 CCR4P51679 360 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 MARCH3Q86UD3 253 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 MVB12AQ96EY5 273 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 SLC41A2Q96JW4 573 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ALG12Q9BV10 488 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 RXFP3Q9NSD7 469 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 OR14J1Q9UGF5 321 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 MRM2Q9UI43 246 aaKnown RBP12.98□□□□□ -0.33
CDT1-201ENST00000301019 TIMM10BQ9Y5J6 103 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 SDK1Q7Z5N4 2213 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 LOC390937A0A1W2PQ73 354 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 H0YL77 283 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ZNF749O43361 778 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ZBTB25P24278 435 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 TAGLN2P37802 199 aaKnown RBP12.98□□□□□ -0.33
CDT1-201ENST00000301019 CAMLGP49069 296 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 PKIAP61925 76 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ZNF239Q16600 458 aaKnown RBP12.98□□□□□ -0.33
CDT1-201ENST00000301019 HAGHQ16775 308 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ALG10BQ5I7T1 473 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 CCDC74AQ96AQ1 378 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 EGLN1Q9GZT9 426 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 TMEM100Q9NV29 134 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 SLC25A13Q9UJS0 675 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 RAB22AQ9UL26 194 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 TEX13DA0A0J9YY54 714 aaPredicted RBP12.98□□□□□ -0.33
CDT1-201ENST00000301019 CDC40O60508 579 aaKnown RBP eCLIP12.98□□□□□ -0.339e-6■■■□□ 15.9
CDT1-201ENST00000301019 GDI1P31150 447 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 IL2RGP31785 369 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ACTBP60709 375 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ACTG1P63261 375 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 RELQ04864 619 aaPredicted RBP12.98□□□□□ -0.33
CDT1-201ENST00000301019 TNFRSF9Q07011 255 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 FJX1Q86VR8 437 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ZNF610Q8N9Z0 462 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 UBE2E3Q969T4 207 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ZNF689Q96CS4 500 aaPredicted RBP12.98□□□□□ -0.33
CDT1-201ENST00000301019 WIF1Q9Y5W5 379 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 KPTNQ9Y664 436 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 COLEC10Q9Y6Z7 277 aa12.98□□□□□ -0.33
CDT1-201ENST00000301019 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 GRM6O15303 877 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 LMX1BO60663 402 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 ABLIM3O94929 683 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 CD5P06127 495 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 ADRB3P13945 408 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 CD53P19397 219 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 MAP3K8P41279 467 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 GPR1P46091 355 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 ZNHIT3Q15649 155 aaPredicted RBP12.97□□□□□ -0.33
CDT1-201ENST00000301019 TCTN1Q2MV58 587 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 NLRC5Q86WI3 1866 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 ZNF664Q8N3J9 261 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 Q8WTZ3 238 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 WDR92Q96MX6 357 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 KLF16Q9BXK1 252 aaPredicted RBP12.97□□□□□ -0.33
CDT1-201ENST00000301019 OPN3Q9H1Y3 402 aaPredicted RBP12.97□□□□□ -0.33
CDT1-201ENST00000301019 SH3BGRL3Q9H299 93 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 LAMP5Q9UJQ1 280 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 ZNF780BQ9Y6R6 833 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 A0A1B0GWA3 101 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 OR5H15A6NDH6 313 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 OR5H1A6NKK0 313 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 TUBG1P23258 451 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 SLC6A6P31641 620 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 PPP1CCP36873 323 aaKnown RBP12.97□□□□□ -0.33
CDT1-201ENST00000301019 TRA2AQ13595 282 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDT1-201ENST00000301019 C1orf53Q5VUE5 145 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 DMRTA1Q5VZB9 504 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 GGNBP1Q5YKI7 109 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 THNSL2Q86YJ6 484 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 LRRC18Q8N456 261 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 OR2L2Q8NH16 312 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 PLD4Q96BZ4 506 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 DTD2Q96FN9 168 aa12.97□□□□□ -0.33
CDT1-201ENST00000301019 SMCO3A2RU48 225 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 XRCC2O43543 280 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 TGM5O43548 720 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 SRPX2O60687 465 aaPredicted RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 ERVFRD-1P60508 538 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 PMPCAQ10713 525 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 BIKQ13323 160 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 ENPP2Q13822 863 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 C19orf47Q8N9M1 422 aaKnown RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 ADAMTS17Q8TE56 1095 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 GPX8Q8TED1 209 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 MRGPRFQ96AM1 343 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 SLC2A8Q9NY64 477 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 TAS2R4Q9NYW5 299 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms