RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 WDR77Q9BQA1 342 aaPredicted RBP13.18□□□□□ -0.3
COL6A2-201ENST00000300527 SEC11CQ9BY50 192 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 MMP25Q9NPA2 562 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 HRASLS2Q9NWW9 162 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 PRSS38A1L453 326 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 C9JQL5 133 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 CSRP1P21291 193 aaKnown RBP13.18□□□□□ -0.3
COL6A2-201ENST00000300527 GDI1P31150 447 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 SLC18B1Q6NT16 456 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 BCORP1Q8N888 145 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 SEMA6DQ8NFY4 1073 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 OTOSQ8NHW6 89 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 ASB5Q8WWX0 329 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 LRFN5Q96NI6 719 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 KIR3DX1Q9H7L2 352 aa13.18□□□□□ -0.3
COL6A2-201ENST00000300527 RCC2Q9P258 522 aaKnown RBP13.18□□□□□ -0.3
COL6A2-201ENST00000300527 LOC101059948A0A1B0GTJ6 334 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 TIMP1P01033 207 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 C16orf52Q8NHV5 167 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 NT5CQ8TCD5 201 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 EDAQ92838 391 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 SLC22A18Q96BI1 424 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 TMEM41AQ96HV5 264 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF587Q96SQ5 575 aaPredicted RBP13.17□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF251Q9BRH9 671 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 FN3KRPQ9HA64 309 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 COLCA2A8K830 154 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 SDCBPO00560 298 aaPredicted RBP13.17□□□□□ -0.3
COL6A2-201ENST00000300527 HCRTR2O43614 444 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 KAT7O95251 611 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 KNG1P01042 644 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 CD74P04233 296 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 MEF2DQ14814 521 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 LINC00114Q6XXX2 140 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 TAAR8Q969N4 342 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 FGGYQ96C11 551 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 DGAT2Q96PD7 388 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 OR8B4Q96RC9 309 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 CARHSP1Q9Y2V2 147 aaKnown RBP13.17□□□□□ -0.3
COL6A2-201ENST00000300527 THSD7BQ9C0I4 1608 aa13.17□□□□□ -0.3
COL6A2-201ENST00000300527 LOC107986453A0A1B0GWG9 222 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-201ENST00000300527 FAM78AQ5JUQ0 283 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 TTLL10Q6ZVT0 673 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 OR13C9Q8NGT0 318 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF524Q96C55 264 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-201ENST00000300527 NRSN2Q9GZP1 204 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 RNF208Q9H0X6 261 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 LPAR3Q9UBY5 353 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 HEBP2Q9Y5Z4 205 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 SLC25A1P53007 311 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 DMWDQ09019 674 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 RAB32Q13637 225 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 ACER2Q5QJU3 275 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 MED25Q71SY5 747 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 PPP1R3BQ86XI6 285 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 OR4K15Q8NH41 348 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 RPS4Y2Q8TD47 263 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 ADOQ96SZ5 270 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
COL6A2-201ENST00000300527 RGCCQ9H4X1 137 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 MAFFQ9ULX9 164 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 YBX2Q9Y2T7 364 aaKnown RBP13.16□□□□□ -0.3
COL6A2-201ENST00000300527 EFCAB7A8K855 629 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 EFSO43281 561 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 Q6ZRG5 221 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-201ENST00000300527 MISPQ8IVT2 679 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
COL6A2-201ENST00000300527 IP6K3Q96PC2 410 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 RNF126Q9BV68 326 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 HIF3AQ9Y2N7 669 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 AMDHD2Q9Y303 409 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 LRP12Q9Y561 859 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 FREM3P0C091 2139 aa13.16□□□□□ -0.3
COL6A2-201ENST00000300527 FGF16O43320 207 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 MBTPS2O43462 519 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 NME2P1O60361 137 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF44P15621 663 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 CXCR1P25024 350 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 TM4SF4P48230 202 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 WBP2NLQ6ICG8 309 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 DHRS11Q6UWP2 260 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF600Q6ZNG1 722 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 PRSS58Q8IYP2 241 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ZNF679Q8IYX0 411 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 HIST1H2BAQ96A08 127 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 ABHD6Q9BV23 337 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 BANF2Q9H503 90 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 KIF26BQ2KJY2 2108 aa13.15□□□□□ -0.3
COL6A2-201ENST00000300527 MPIG6BO95866 241 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms