RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 URGCP-MRPS24S4R325 110 aa12.01□□□□□ -0.49
CASC4-201ENST00000299957 BET1O15155 118 aa12□□□□□ -0.49
CASC4-201ENST00000299957 XRCC3O43542 346 aa12□□□□□ -0.49
CASC4-201ENST00000299957 IL33O95760 270 aa12□□□□□ -0.49
CASC4-201ENST00000299957 GPR85P60893 370 aa12□□□□□ -0.49
CASC4-201ENST00000299957 HSD11B2P80365 405 aa12□□□□□ -0.49
CASC4-201ENST00000299957 ZNF117Q03924 483 aa12□□□□□ -0.49
CASC4-201ENST00000299957 SNTB1Q13884 538 aaKnown RBP12□□□□□ -0.49
CASC4-201ENST00000299957 CLLU1Q5K131 121 aa12□□□□□ -0.49
CASC4-201ENST00000299957 SLC35D3Q5M8T2 416 aa12□□□□□ -0.49
CASC4-201ENST00000299957 CLVS2Q5SYC1 327 aa12□□□□□ -0.49
CASC4-201ENST00000299957 KIAA0895LQ68EN5 471 aa12□□□□□ -0.49
CASC4-201ENST00000299957 TMEM217Q8N7C4 229 aa12□□□□□ -0.49
CASC4-201ENST00000299957 BHLHE23Q8NDY6 225 aa12□□□□□ -0.49
CASC4-201ENST00000299957 FNDC9Q8TBE3 224 aa12□□□□□ -0.49
CASC4-201ENST00000299957 APOBEC4Q8WW27 367 aaKnown RBP12□□□□□ -0.49
CASC4-201ENST00000299957 ARL5BQ96KC2 179 aa12□□□□□ -0.49
CASC4-201ENST00000299957 C10orf90Q96M02 699 aa12□□□□□ -0.49
CASC4-201ENST00000299957 OR6C1Q96RD1 312 aa12□□□□□ -0.49
CASC4-201ENST00000299957 RARRES3Q9UL19 164 aa12□□□□□ -0.49
CASC4-201ENST00000299957 PIN1P1O15428 100 aa12□□□□□ -0.49
CASC4-201ENST00000299957 CTAG2O75638 210 aa12□□□□□ -0.49
CASC4-201ENST00000299957 CXCL2P19875 107 aa12□□□□□ -0.49
CASC4-201ENST00000299957 POLR2HP52434 150 aaKnown RBP12□□□□□ -0.49
CASC4-201ENST00000299957 MTCP1P56278 107 aa12□□□□□ -0.49
CASC4-201ENST00000299957 YPEL5P62699 121 aa12□□□□□ -0.49
CASC4-201ENST00000299957 SP6Q3SY56 376 aa12□□□□□ -0.49
CASC4-201ENST00000299957 ADAM5Q6NVV9 412 aa12□□□□□ -0.49
CASC4-201ENST00000299957 FAM86C1Q9NVL1 165 aa12□□□□□ -0.49
CASC4-201ENST00000299957 ETV7Q9Y603 341 aa12□□□□□ -0.49
CASC4-201ENST00000299957 TO15178 435 aa12□□□□□ -0.49
CASC4-201ENST00000299957 ANGPTL7O43827 346 aa12□□□□□ -0.49
CASC4-201ENST00000299957 ADAP1O75689 374 aa12□□□□□ -0.49
CASC4-201ENST00000299957 DIRAS3O95661 229 aa12□□□□□ -0.49
CASC4-201ENST00000299957 PMS2P2O95744 297 aa12□□□□□ -0.49
CASC4-201ENST00000299957 HLA-DOBP13765 273 aa12□□□□□ -0.49
CASC4-201ENST00000299957 DAP3P51398 398 aaKnown RBP12□□□□□ -0.49
CASC4-201ENST00000299957 HSD17B7P56937 341 aa12□□□□□ -0.49
CASC4-201ENST00000299957 DHRS2Q13268 280 aa12□□□□□ -0.49
CASC4-201ENST00000299957 NPSR1Q6W5P4 371 aa12□□□□□ -0.49
CASC4-201ENST00000299957 C20orf196Q8IYI0 205 aa12□□□□□ -0.49
CASC4-201ENST00000299957 PIGCQ92535 297 aa12□□□□□ -0.49
CASC4-201ENST00000299957 ZNF845Q96IR2 970 aaPredicted RBP12□□□□□ -0.49
CASC4-201ENST00000299957 MRI1Q9BV20 369 aa12□□□□□ -0.49
CASC4-201ENST00000299957 FOXQ1Q9C009 403 aa12□□□□□ -0.49
CASC4-201ENST00000299957 GPR84Q9NQS5 396 aa12□□□□□ -0.49
CASC4-201ENST00000299957 CYR61O00622 381 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 XRCC2O43543 280 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 HLA-DQB1P01920 261 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 SULT1A3P0DMM9 295 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 SULT1A4P0DMN0 295 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 IL9P15248 144 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 TAF9Q16594 264 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 GPR157Q5UAW9 335 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 ZNF529Q6P280 563 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 TRILQ7L0X0 811 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 SLAMF6Q96DU3 332 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 PGLYRP3Q96LB9 341 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 C4orf45Q96LM5 186 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 ZFP64Q9NPA5 681 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.99□□□□□ -0.49
CASC4-201ENST00000299957 ST6GALNAC2Q9UJ37 374 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 DIDO1Q9BTC0 2240 aaKnown RBP11.99□□□□□ -0.49
CASC4-201ENST00000299957 VWA8A3KMH1 1905 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 BDP1A6H8Y1 2624 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 C9J4A7 227 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 K7EQS6 105 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 ADAM10O14672 748 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 SULT1B1O43704 296 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 ACAA2P42765 397 aaKnown RBP11.99□□□□□ -0.49
CASC4-201ENST00000299957 TNFRSF4P43489 277 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 PPP1R1AQ13522 171 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 MEF2DQ14814 521 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 CDONQ4KMG0 1287 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 SGPP2Q8IWX5 399 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 OR14L1PQ8NHC6 308 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 TMPRSS13Q9BYE2 586 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 NXT1Q9UKK6 140 aaKnown RBP11.99□□□□□ -0.49
CASC4-201ENST00000299957 ABCA1O95477 2261 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 MEX3AA1L020 520 aaKnown RBP11.99□□□□□ -0.49
CASC4-201ENST00000299957 TLE1Q04724 770 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 KLF9Q13886 244 aaPredicted RBP11.99□□□□□ -0.49
CASC4-201ENST00000299957 KCNRGQ8N5I3 272 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 ASB17Q8WXJ9 295 aa11.99□□□□□ -0.49
CASC4-201ENST00000299957 PTPRDP23468 1912 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 MED13LQ71F56 2210 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 A0A0D9SG52 128 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 GPR31O00270 319 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 RAD51DO75771 328 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 CSNK1A1P48729 337 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 RPS27AP62979 156 aaKnown RBP11.98□□□□□ -0.49
CASC4-201ENST00000299957 UBA52P62987 128 aaKnown RBP11.98□□□□□ -0.49
CASC4-201ENST00000299957 PPA1Q15181 289 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 PDSS1Q5T2R2 415 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 OGFOD3Q6PK18 319 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 C19orf48Q6RUI8 117 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 ZNF611Q8N823 705 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 OTOSQ8NHW6 89 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 MARC2Q969Z3 335 aa11.98□□□□□ -0.49
CASC4-201ENST00000299957 SULT4A1Q9BR01 284 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms