RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ERP29P30040 261 aaKnown RBP10.5□□□□□ -0.73
HMGB2-201ENST00000296503 FMO3P31513 532 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 LIPAP38571 399 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 GIPRP48546 466 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 DAPP51397 102 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 NKX6-1P78426 367 aaPredicted RBP10.5□□□□□ -0.73
HMGB2-201ENST00000296503 NAAAQ02083 359 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 PGGHGQ32M88 737 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 C1orf94Q6P1W5 598 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 SMARCD3Q6STE5 483 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 THSD4Q6ZMP0 1018 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 GDPGP1Q6ZNW5 385 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 IDO2Q6ZQW0 420 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 SLC16A14Q7RTX9 510 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 NOXA1Q86UR1 476 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 FBXL14Q8N1E6 418 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 LRRC18Q8N456 261 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 LINC00471Q8N535 108 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 CLDN22Q8N7P3 220 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 ZNF519Q8TB69 540 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 GTPBP3Q969Y2 492 aaKnown RBP10.5□□□□□ -0.73
HMGB2-201ENST00000296503 PERPQ96FX8 193 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 SDHCQ99643 169 aaPredicted RBP10.5□□□□□ -0.73
HMGB2-201ENST00000296503 RACGAP1Q9H0H5 632 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 CXXC4Q9H2H0 198 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 SEC61A2Q9H9S3 476 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 SAMHD1Q9Y3Z3 626 aaKnown RBP10.5□□□□□ -0.73
HMGB2-201ENST00000296503 IER3IP1Q9Y5U9 82 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 U3KQV3 271 aa10.5□□□□□ -0.73
HMGB2-201ENST00000296503 H7C1C5 153 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 WBP4O75554 376 aaKnown RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 CCNB2O95067 398 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 FADS2O95864 444 aaKnown RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 IGLV1-44P01699 117 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 CDK1P06493 297 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 FPR3P25089 353 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 HLA-DMAP28067 261 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 CDAP32320 146 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 AP2S1P53680 142 aaPredicted RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 LCN6P62502 163 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 IRF3Q14653 427 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 C10orf128Q5T292 105 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 GPR139Q6DWJ6 353 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 SLC25A47Q6Q0C1 308 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 SPNS3Q6ZMD2 512 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 DPY19L2P2Q6ZN68 376 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 ZNF767PQ75MW2 155 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 TCTE3Q8IZS6 198 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 HS3ST5Q8IZT8 346 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 FGFBP3Q8TAT2 258 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 NIPAL2Q9H841 368 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 NRIP3Q9NQ35 241 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 KLHL21Q9UJP4 597 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 ARID1AO14497 2285 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 RAI1Q7Z5J4 1906 aaPredicted RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 OTOGQ6ZRI0 2925 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 IGKV1D-43A0A0B4J1Z2 117 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 TEX13CA0A0J9YWL9 993 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 GASTP01350 101 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 NPR2P20594 1047 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 SDHAP31040 664 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 SLC6A6P31641 620 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 APOBEC3AP31941 199 aaPredicted RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 ZNF133P52736 654 aaPredicted RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 TSPAN31Q12999 210 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 TIGD6Q17RP2 521 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 SLC36A2Q495M3 483 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 PGBD2Q6P3X8 592 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 B3GLCTQ6Y288 498 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 RFPL4BQ6ZWI9 263 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 LRRC75A-AS1Q8N1F1 130 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 MUC15Q8N387 334 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 CELF2-AS1Q8N7Q2 184 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 OR9Q2Q8NGE9 314 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 FANK1Q8TC84 345 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 RASD2Q96D21 266 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 TRMT61AQ96FX7 289 aaKnown RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 MS4A3Q96HJ5 214 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 SAMD8Q96LT4 415 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 ERMAPQ96PL5 475 aaPredicted RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 SLC30A2Q9BRI3 323 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 IFT27Q9BW83 186 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 C6orf62Q9GZU0 229 aaPredicted RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 OR52D1Q9H346 318 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 RERGLQ9H628 205 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 NOX3Q9HBY0 568 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 DDX28Q9NUL7 540 aaKnown RBP10.49□□□□□ -0.73
HMGB2-201ENST00000296503 ZNF224Q9NZL3 707 aa10.49□□□□□ -0.73
HMGB2-201ENST00000296503 A0A1W2PPL8 197 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 SLC22A23A1A5C7 686 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 VSTM5A8MXK1 200 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 TMCC2O75069 709 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 PPP1R3DO95685 299 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 LCKP06239 509 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 NAT1P18440 290 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 GADD45AP24522 165 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 CALCRP30988 508 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 FXYD6P3P58550 94 aa10.48□□□□□ -0.73
HMGB2-201ENST00000296503 MRPS34P82930 218 aaKnown RBP10.48□□□□□ -0.73
HMGB2-201ENST00000296503 TNK1Q13470 666 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms