RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 PSMA6P60900 246 aaKnown RBP21.28■■□□□ 1
TRIM54-201ENST00000296098 MFAP5Q13361 173 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 Q6ZTK2 550 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 PAQR8Q8TEZ7 354 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 FGGYQ96C11 551 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 FOXRED1Q96CU9 486 aaPredicted RBP21.28■■□□□ 1
TRIM54-201ENST00000296098 MOB1AQ9H8S9 216 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 PCDHGA5Q9Y5G8 931 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 WDR87Q6ZQQ6 2873 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 SYT7O43581 403 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 HSD11B1P28845 292 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 SSBP1Q04837 148 aaKnown RBP21.28■■□□□ 1
TRIM54-201ENST00000296098 TMEM156Q8N614 296 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 SORCS2Q96PQ0 1159 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 SEC22CQ9BRL7 303 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 DLL4Q9NR61 685 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 NPTNQ9Y639 398 aa21.28■■□□□ 1
TRIM54-201ENST00000296098 LDLRAD4O15165 306 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 GP1BAP07359 652 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 GTF2F2P13984 249 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 MECP2P51608 486 aaKnown RBP21.27■■□□□ 1
TRIM54-201ENST00000296098 RBMS2Q15434 407 aaKnown RBP21.27■■□□□ 1
TRIM54-201ENST00000296098 HIST3H3Q16695 136 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 SEZ6L2Q6UXD5 910 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 ZNF782Q6ZMW2 699 aaPredicted RBP21.27■■□□□ 1
TRIM54-201ENST00000296098 RPS19BP1Q86WX3 136 aaKnown RBP21.27■■□□□ 1
TRIM54-201ENST00000296098 ZNF436Q9C0F3 470 aaPredicted RBP21.27■■□□□ 1
TRIM54-201ENST00000296098 PROK2Q9HC23 129 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 SH2D2AQ9NP31 389 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 DKKL1Q9UK85 242 aa21.27■■□□□ 1
TRIM54-201ENST00000296098 PHF3Q92576 2039 aaKnown RBP21.27■■□□□ 1
TRIM54-201ENST00000296098 MEIS3P1A6NDR6 274 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 QDPRP09417 244 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 AKAIN1P0CW23 69 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 ANXA7P20073 488 aaKnown RBP21.26■□□□□ 0.99
TRIM54-201ENST00000296098 BDKRB2P30411 391 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 CAPZA1P52907 286 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 DSCR4P56555 118 aaPredicted RBP21.26■□□□□ 0.99
TRIM54-201ENST00000296098 MLF1P58340 268 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 ACTBP60709 375 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 ACTG1P63261 375 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 RAET1LQ5VY80 246 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF627Q7L945 461 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 LYPD6Q86Y78 171 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 GPX8Q8TED1 209 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 MED30Q96HR3 178 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 SMOC1Q9H4F8 434 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 GPN1Q9HCN4 374 aaPredicted RBP21.26■□□□□ 0.99
TRIM54-201ENST00000296098 HPF1Q9NWY4 346 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 SCP2D1Q9UJQ7 156 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 B4E171 279 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 TLX3O43711 291 aaPredicted RBP21.26■□□□□ 0.99
TRIM54-201ENST00000296098 GNALP38405 381 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 TSPAN7P41732 249 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 GABREP78334 506 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 KCNMB1Q16558 191 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 NTNG2Q96CW9 530 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 GNRHR2Q96P88 292 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 ASH2LQ9UBL3 628 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 RHBDD3Q9Y3P4 386 aa21.26■□□□□ 0.99
TRIM54-201ENST00000296098 A0A0A6YYH2 397 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 A6NJ64 397 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 G3V3Y1 287 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 SULT1C2O00338 296 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 IL5P05113 134 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 CLDN17P56750 224 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 TAF13Q15543 124 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 LPAL2Q16609 132 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 RHOUQ7L0Q8 258 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 OR11H4Q8NGC9 324 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 OR4D6Q8NGJ1 314 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 OR1J2Q8NGS2 313 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 PTX4Q96A99 478 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 JSRP1Q96MG2 331 aaPredicted RBP21.25■□□□□ 0.99
TRIM54-201ENST00000296098 GAL3ST1Q99999 423 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 NPDC1Q9NQX5 325 aaPredicted RBP21.25■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF69Q9UC07 566 aa21.25■□□□□ 0.99
TRIM54-201ENST00000296098 CREBL2O60519 120 aaPredicted RBP21.24■□□□□ 0.99
TRIM54-201ENST00000296098 LPLP06858 475 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 NR2C1P13056 603 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 ACP1P24666 158 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 SELENOPP49908 381 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 CLDN6P56747 220 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF813Q6ZN06 617 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 OR1M1Q8NGA1 313 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 OR4D10Q8NGI6 311 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 ADAT3Q96EY9 351 aaPredicted RBP21.24■□□□□ 0.99
TRIM54-201ENST00000296098 GINS4Q9BRT9 223 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 COL27A1Q8IZC6 1860 aaPredicted RBP21.24■□□□□ 0.99
TRIM54-201ENST00000296098 IGHEP01854 428 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 CPN1P15169 458 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 H3F3AP84243 136 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF626Q68DY1 528 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 CLEC1AQ8NC01 280 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 GPR137Q96N19 417 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 METTL17Q9H7H0 456 aaPredicted RBP21.24■□□□□ 0.99
TRIM54-201ENST00000296098 SCPEP1Q9HB40 452 aa21.24■□□□□ 0.99
TRIM54-201ENST00000296098 OR2M5A3KFT3 312 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 SNRPGP15A8MWD9 76 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 PYCARD-AS1I3L0S3 204 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms