RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 EIF4EP06730 217 aaKnown RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 PARP16Q8N5Y8 322 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 KIF25Q9UIL4 384 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 B9D1Q9UPM9 204 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 FOSL1P15407 271 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 SRP9P49458 86 aaKnown RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 SNRPD2P62316 118 aaKnown RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 C9orf152Q5JTZ5 239 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 SDSLQ96GA7 329 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 ABCD4O14678 606 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 IGFBP1P08833 259 aaPredicted RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 ECI1P42126 302 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 NKX2-5P52952 324 aaPredicted RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 ISL1P61371 349 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 AGERQ15109 404 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF74Q16587 644 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 REEP6Q96HR9 211 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 SIAEQ9HAT2 523 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 NECAP2Q9NVZ3 263 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF225Q9UK10 706 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 SPAG17Q6Q759 2223 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 APOA2P02652 100 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 CTXN2P0C2S0 81 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 ALDH3B1P43353 468 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 RRAS2P62070 204 aaPredicted RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 RAC1P63000 192 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 KIAA0040Q15053 153 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 CPEB4Q17RY0 729 aaKnown RBP eCLIP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 PDLIM3Q53GG5 364 aaPredicted RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 RIMKLAQ8IXN7 391 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 DEDD2Q8WXF8 326 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 C1orf123Q9NWV4 160 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 PTTG3PQ9NZH4 202 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 GDF2Q9UK05 429 aaPredicted RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZC3H12DA2A288 527 aaKnown RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 FBXL14Q8N1E6 418 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 TCTEX1D2Q8WW35 142 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 DUS3LQ96G46 650 aaKnown RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 MFFQ9GZY8 342 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 R4GMQ9 66 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 HS3ST1O14792 307 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 SULT1B1O43704 296 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 SFTPCP11686 197 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 GABRA1P14867 456 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF767PQ75MW2 155 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR56B4Q8NH76 319 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 OIT3Q8WWZ8 545 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 APOBEC3DQ96AK3 386 aaPredicted RBP16■□□□□ 0.15
CDC42EP3-201ENST00000295324 FAM234AQ9H0X4 552 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 TAS2R4Q9NYW5 299 aa16■□□□□ 0.15
CDC42EP3-201ENST00000295324 A0A1W2PPV4 95 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 TSPAN15O95858 294 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 AQP6Q13520 282 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR13F1Q8NGS4 319 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 ELMOD3Q96FG2 381 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 SIGLEC11Q96RL6 698 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 F8W036 122 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 HOXB3P14651 431 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 BMP5P22003 454 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 BLOC1S1P78537 153 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 SFRP5Q5T4F7 317 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZDHHC23Q8IYP9 409 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 ANKRD9Q96BM1 317 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 PSD2Q9BQI7 771 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 ASCC3Q8N3C0 2202 aaKnown RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 HOXA1P49639 335 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 ELP2Q6IA86 826 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 PLXDC2Q6UX71 529 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 KTI12Q96EK9 354 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 BIN3Q9NQY0 253 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 GPATCH2Q9NW75 528 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 ATG2BQ96BY7 2078 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 PSMB1P20618 241 aaKnown RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 SLC17A1Q14916 467 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 GSG1Q2KHT4 349 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF321PQ8N8H1 164 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR1J1Q8NGS3 322 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 LIN37Q96GY3 246 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 PLCXD1Q9NUJ7 323 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 A0A0B4J2E0 115 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 A0A1B0GX12 115 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 FAM90A27PA6NNH2 459 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 MED6O75586 246 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 GNB2P62879 340 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 PCK2Q16822 640 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 FBXO17Q96EF6 278 aa15.99■□□□□ 0.15
CDC42EP3-201ENST00000295324 CD79BP40259 229 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 HNRNPFP52597 415 aaKnown RBP15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 RAB1AP62820 205 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 ISXQ2M1V0 245 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 STEAP1BQ6NZ63 245 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 TFAP2EQ6VUC0 442 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 PRSS35Q8N3Z0 413 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 MMP25Q9NPA2 562 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 TNFRSF1AP19438 455 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 EBPQ15125 230 aaKnown RBP15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 TOMM34Q15785 309 aaPredicted RBP15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 PAQR6Q6TCH4 344 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 BORCS7Q96B45 105 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms