RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 TUBA1CQ9BQE3 449 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 TRIM36Q9NQ86 728 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 MED13Q9UHV7 2174 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM96BQ9Y3D0 163 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ZFHX4Q86UP3 3567 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 CXCL13O43927 109 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 GNAO1P09471 354 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 TGM4P49221 684 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 CDK5R2Q13319 367 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 GUSBP1Q15486 140 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ACKR1Q16570 336 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 NSUN5P2Q63ZY6 315 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 PLBD1Q6P4A8 553 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 PCSK4Q6UW60 755 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 DCDC5Q6ZRR9 648 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC35D2Q76EJ3 337 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ABHD12BQ7Z5M8 362 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 IQCF1Q8N6M8 205 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ST6GALNAC3Q8NDV1 305 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM46BQ96A09 425 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 HAVCR1Q96D42 359 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 CPNE2Q96FN4 548 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC6A7Q99884 636 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 LINC00470Q9BZP3 86 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM234AQ9H0X4 552 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 SEC14L4Q9UDX3 406 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF346Q9UL40 294 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 MGAT4AQ9UM21 535 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 IER3IP1Q9Y5U9 82 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 H7C1C5 153 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 DVL2O14641 736 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 ARL6IP5O75915 188 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 RLN2P04090 185 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 NDUFB7P17568 137 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 POLR2IP36954 125 aaKnown RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 FABP6P51161 128 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 FXYD4P59646 89 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 LCN6P62502 163 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 NPEPL1Q8NDH3 523 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 S100PBPQ96BU1 408 aa7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 FBXO9Q9UK97 447 aaPredicted RBP7.48□□□□□ -1.21
PTPDC1-201ENST00000288976 PCNX3Q9H6A9 2034 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 PRSS37A4D1T9 235 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC22A20A6NK97 555 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 IGHG1P01857 330 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 HEXAP06865 529 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 PGA4P0DJD7 388 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 PGA3P0DJD8 388 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 HTR1FP30939 366 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 LRRC37A5PQ49AS3 106 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 ACSF3Q4G176 576 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 C1QTNF12Q5T7M4 302 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 C1orf185Q5T7R7 199 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 AADACL4Q5VUY2 407 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 TMEM236Q5W0B7 351 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 OR6Q1Q8NGQ2 317 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF582Q96NG8 517 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 EMC6Q9BV81 110 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MRPL13Q9BYD1 178 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 DHDHQ9UQ10 334 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 NAV2Q8IVL1 2488 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 TRBV2A0A0J9YWF9 115 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 A0A1B0GTH9 108 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MEX3AA1L020 520 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MBD3L4A6NDZ8 208 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MBD3L3A6NE82 208 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MBD3L5A6NJ08 208 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 ZSCAN5BA6NJL1 495 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC22A31A6NKX4 558 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MPIG6BO95866 241 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 GRPP07492 148 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 HIST1H1CP16403 213 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 CRABP1P29762 137 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 SLC22A6Q4U2R8 563 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 THEM4Q5T1C6 240 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 C10orf128Q5T292 105 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MTFR2Q6P444 385 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 FOXL2NBQ6ZUU3 175 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 KLBQ86Z14 1044 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 OR5AS1Q8N127 324 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 TMEM123Q8N131 208 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 SDR9C7Q8NEX9 313 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MBD3L2Q8NHZ7 208 aaPredicted RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 S100ZQ8WXG8 99 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 MNTQ99583 582 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 WACQ9BTA9 647 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 EXOGQ9Y2C4 368 aaKnown RBP7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 FLVCR1Q9Y5Y0 555 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 A0A096LPE4 126 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 A0A1W2PPZ6 126 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 FAM183AA6NL82 134 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 IFNA21P01568 189 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 NFYBP25208 207 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 SDC2P34741 201 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 PTGS2P35354 604 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 NRN1LQ496H8 165 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 C6orf141Q5SZD1 244 aa7.47□□□□□ -1.21
PTPDC1-201ENST00000288976 ZNF362Q5T0B9 420 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms