RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 DNAJB11Q9UBS4 358 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 IER3IP1Q9Y5U9 82 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 FANCMQ8IYD8 2048 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 ALPK2Q86TB3 2170 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 CDH23Q9H251 3354 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 FAM221BA6H8Z2 402 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 B4DGG1 531 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 SOX15O60248 233 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 CTNSO60931 367 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 ALOX12BO75342 701 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 RPP14O95059 124 aaKnown RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 TXNDC12O95881 172 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 AMY2AP04746 511 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 CTSBP07858 339 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 FBXO45P0C2W1 286 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 HIST1H1BP16401 226 aaKnown RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 ADRA2CP18825 462 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 MAP3K8P41279 467 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 ACAA2P42765 397 aaKnown RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 LPAR6P43657 344 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 MRPS10P82664 201 aaKnown RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 MEF2DQ14814 521 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 OR8G1Q15617 311 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 NKPD1Q17RQ9 610 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 TMEM244Q5VVB8 128 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 GALNT16Q8N428 558 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 PAQR4Q8N4S7 273 aaPredicted RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 NUDCD2Q8WVJ2 157 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 RRNAD1Q96FB5 475 aaKnown RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 DNAJB12Q9NXW2 375 aaKnown RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 LPAR3Q9UBY5 353 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 MRPS33Q9Y291 106 aaKnown RBP6.86□□□□□ -1.31
TRIM6-201ENST00000278302 CSAG2Q9Y5P2 127 aa6.86□□□□□ -1.31
TRIM6-201ENST00000278302 F5P12259 2224 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ARHGEF17Q96PE2 2063 aaPredicted RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 A0A1B0GTI1 187 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 MSGN1A6NI15 193 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 PRAMEF26H0Y7S4 382 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 HRKO00198 91 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 MED6O75586 246 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 NDUFB2O95178 105 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 IGKV1D-16P01601 117 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 NGFRP08138 427 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 RAB40ALP0C0E4 278 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 SLC25A4P12235 298 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 RNH1P13489 461 aaKnown RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 HIST1H1CP16403 213 aaKnown RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 GABRG2P18507 467 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 RPS10P46783 165 aaKnown RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 PLAURQ03405 335 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 VWA2Q5GFL6 755 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ATPAF1Q5TC12 328 aaPredicted RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 OR2A2Q6IF42 318 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ULK3Q6PHR2 472 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 IL34Q6ZMJ4 242 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 BHLHE23Q8NDY6 225 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 OR4K17Q8NGC6 315 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 SLC2A12Q8TD20 617 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 RAB40AQ8WXH6 277 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ROBO4Q8WZ75 1007 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ZBTB8AQ96BR9 441 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 KIRREL1Q96J84 757 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 SPACA7Q96KW9 195 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 DGAT2Q96PD7 388 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 S1PR5Q9H228 398 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 Q9N2J8 555 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 PRTFDC1Q9NRG1 225 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 CLEC1BQ9P126 229 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ATG2AQ2TAZ0 1938 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 DCTN6O00399 190 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 OGG1O15527 345 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ZFPL1O95159 310 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 CSTAP01040 98 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 ITGB2P05107 769 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 HEXBP07686 556 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 HOXB5P09067 269 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 CSF1P09603 554 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 THEGLP0DJG4 465 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 EDN3P14138 238 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 HOXA5P20719 270 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 SLC2A5P22732 501 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 PAX6P26367 422 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 NANOS3P60323 173 aaKnown RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 NSUN5P2Q63ZY6 315 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 PAPD4Q6PIY7 484 aaKnown RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 KIRREL2Q6UWL6 708 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 STAC2Q6ZMT1 411 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 BIVMQ86UB2 503 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 DND1Q8IYX4 353 aaKnown RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 SLC22A18ASQ8N1D0 253 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 C10orf53Q8N6V4 93 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 OR51D1Q8NGF3 324 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 GPR148Q8TDV2 347 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 SLC25A43Q8WUT9 341 aaPredicted RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 CCDC107Q8WV48 283 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 MAFIPQ8WZ33 124 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 LMF2Q9BU23 707 aaKnown RBP6.85□□□□□ -1.31
TRIM6-201ENST00000278302 GPR61Q9BZJ8 451 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 RAB33BQ9H082 229 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms