RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 RP2O75695 350 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GATBO75879 557 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 CPNE6O95741 557 aa2.58□□□□□ -2
HERC4-201ENST00000277817 APOC3P02656 99 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ACAA1P09110 424 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 TMEM225BP0DP42 221 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SRD5A1P18405 259 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLC2A5P22732 501 aa2.58□□□□□ -2
HERC4-201ENST00000277817 UCP1P25874 307 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GABRA5P31644 462 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SFTPDP35247 375 aa2.58□□□□□ -2
HERC4-201ENST00000277817 UGT2B10P36537 528 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ETV5P41161 510 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RPS5P46782 204 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 TGM4P49221 684 aa2.58□□□□□ -2
HERC4-201ENST00000277817 FOXE3Q13461 319 aa2.58□□□□□ -2
HERC4-201ENST00000277817 AQP6Q13520 282 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SERTAD2Q14140 314 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CRMP1Q14194 572 aa2.58□□□□□ -2
HERC4-201ENST00000277817 IHHQ14623 411 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RAB11BQ15907 218 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PYCR3Q53H96 274 aa2.58□□□□□ -2
HERC4-201ENST00000277817 AGBL4Q5VU57 503 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLX4IPQ5VYV7 408 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TCEAL6Q6IPX3 200 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PARM1Q6UWI2 310 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CLEC18BQ6UXF7 455 aa2.58□□□□□ -2
HERC4-201ENST00000277817 Q6ZNB5 142 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MBOAT2Q6ZWT7 520 aa2.58□□□□□ -2
HERC4-201ENST00000277817 STX12Q86Y82 276 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PLCZ1Q86YW0 608 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MSRB3Q8IXL7 192 aa2.58□□□□□ -2
HERC4-201ENST00000277817 BEST3Q8N1M1 668 aa2.58□□□□□ -2
HERC4-201ENST00000277817 BOLLQ8N9W6 283 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 CLEC18CQ8NCF0 446 aa2.58□□□□□ -2
HERC4-201ENST00000277817 VN1R2Q8NFZ6 395 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ABHD4Q8TB40 342 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SYNPRQ8TBG9 265 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SFXN5Q8TD22 340 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GPR148Q8TDV2 347 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SMAP2Q8WU79 429 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 NEU4Q8WWR8 484 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 TM9SF4Q92544 642 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DAZAP1Q96EP5 407 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 SCGB3A2Q96PL1 93 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NMNAT3Q96T66 252 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PELOQ9BRX2 385 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 GPR87Q9BY21 358 aa2.58□□□□□ -2
HERC4-201ENST00000277817 POTEKPQ9BYX7 375 aa2.58□□□□□ -2
HERC4-201ENST00000277817 HOXD1Q9GZZ0 328 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OR51J1Q9H342 316 aa2.58□□□□□ -2
HERC4-201ENST00000277817 HHATLQ9HCP6 504 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SEMA4GQ9NTN9 838 aa2.58□□□□□ -2
HERC4-201ENST00000277817 FKBP14Q9NWM8 211 aa2.58□□□□□ -2
HERC4-201ENST00000277817 COPZ2Q9P299 210 aa2.58□□□□□ -2
HERC4-201ENST00000277817 THAP10Q9P2Z0 257 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 C19orf25Q9UFG5 118 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 DKKL1Q9UK85 242 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NUP50Q9UKX7 468 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLC35A3Q9Y2D2 325 aa2.58□□□□□ -2
HERC4-201ENST00000277817 YARS2Q9Y2Z4 477 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 MUC6Q6W4X9 2439 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GVINP1Q7Z2Y8 2422 aa2.58□□□□□ -2
HERC4-201ENST00000277817 A0A087X0K7 114 aa2.58□□□□□ -2
HERC4-201ENST00000277817 KIR2DS5A0A0G2JLQ3 304 aa2.58□□□□□ -2
HERC4-201ENST00000277817 A0A0G2JNG1 304 aa2.58□□□□□ -2
HERC4-201ENST00000277817 A0A1W2PP11 408 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NPIPA2E9PIF3 369 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NPIPA3F8WFD2 350 aa2.58□□□□□ -2
HERC4-201ENST00000277817 H7C1C5 153 aa2.58□□□□□ -2
HERC4-201ENST00000277817 KIR2DS3K7RE56 304 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TP53I11O14683 189 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DSCR3O14972 297 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SSX5O60225 188 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PRKNO60260 465 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 PRAF2O60831 178 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GPX5O75715 221 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ALDOBP05062 364 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PNMTP11086 282 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CPN1P15169 458 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MAKP20794 623 aa2.58□□□□□ -2
HERC4-201ENST00000277817 COL8A1P27658 744 aa2.58□□□□□ -2
HERC4-201ENST00000277817 HLA-DMAP28067 261 aa2.58□□□□□ -2
HERC4-201ENST00000277817 AQP2P41181 271 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MAGEB1P43366 347 aa2.58□□□□□ -2
HERC4-201ENST00000277817 HCCSP53701 268 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RAB2AP61019 212 aa2.58□□□□□ -2
HERC4-201ENST00000277817 LCN6P62502 163 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DLK1P80370 383 aa2.58□□□□□ -2
HERC4-201ENST00000277817 REEP5Q00765 189 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DYRK1AQ13627 763 aa2.58□□□□□ -2
HERC4-201ENST00000277817 EIF2B1Q14232 305 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 KIR2DS5Q14953 304 aa2.58□□□□□ -2
HERC4-201ENST00000277817 KIAA0040Q15053 153 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ZNF77Q15935 545 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CHRFAM7AQ494W8 412 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TMEM52BQ4KMG9 183 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SYT14P1Q58G82 188 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RNASE10Q5GAN6 216 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 FAM76BQ5HYJ3 339 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms