RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 MRPS10P82664 201 aaKnown RBP18.53■□□□□ 0.56
CACNA1B-201ENST00000277549 SIAH3Q8IW03 269 aa18.53■□□□□ 0.56
CACNA1B-201ENST00000277549 LYSMD1Q96S90 227 aa18.53■□□□□ 0.56
CACNA1B-201ENST00000277549 KIR3DX1Q9H7L2 352 aa18.53■□□□□ 0.56
CACNA1B-201ENST00000277549 RNF113BQ8IZP6 322 aaKnown RBP18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 PRRT4C9JH25 899 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 KCNAB3O43448 404 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 MLLT11Q13015 90 aaPredicted RBP18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 FRMPD2BQ6IN97 320 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 TOX2Q96NM4 488 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 NIPSNAP1Q9BPW8 284 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 CRISPLD2Q9H0B8 497 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 CCL2P13500 99 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 ST6GAL1P15907 406 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 RNFT1Q5M7Z0 435 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 OR10K2Q6IF99 312 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 C15orf39Q6ZRI6 1047 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 OR5M8Q8NGP6 311 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 ARRDC2Q8TBH0 407 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 CLEC2LP0C7M8 214 aa18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 ZNF486Q96H40 463 aaPredicted RBP18.52■□□□□ 0.56
CACNA1B-201ENST00000277549 MYO9BQ13459 2157 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 IFT172Q9UG01 1749 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 PAPLNO95428 1278 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 APELAP0DMC3 54 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 FECHP22830 423 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 DUSP6Q16828 381 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 WIPI1Q5MNZ9 446 aaPredicted RBP18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 OR10R2Q8NGX6 335 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 C20orf85Q9H1P6 137 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 BCO1Q9HAY6 547 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 TAF9BQ9HBM6 251 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 AK3Q9UIJ7 227 aa18.52■□□□□ 0.55
CACNA1B-201ENST00000277549 FPR3P25089 353 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 TCTN3Q6NUS6 607 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 ACSM6Q6P461 480 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 ZDHHC23Q8IYP9 409 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 MBLAC1A4D2B0 266 aaPredicted RBP18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 ARHGAP33O14559 1287 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 C7P10643 843 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 AMTP48728 403 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 SLCO4C1Q6ZQN7 724 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 OR6S1Q8NH40 331 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 RPUSD4Q96CM3 377 aaKnown RBP18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 NUDT9Q9BW91 350 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 RAB22AQ9UL26 194 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 FGF4P08620 206 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 DLX5P56178 289 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 CLN3Q13286 438 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 KMT5CQ86Y97 462 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 NKAIN4Q8IVV8 208 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 RPL3LQ92901 407 aaKnown RBP18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 SAGE1Q9NXZ1 904 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 H3BMH7 237 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 TAPBPO15533 448 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 SLCO2B1O94956 709 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 HBE1P02100 147 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 FAAP20Q6NZ36 180 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 SFTPA2Q8IWL1 248 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 SFTPA1Q8IWL2 248 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 GATCO43716 136 aaKnown RBP18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 SOD1P00441 154 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 BMP2P12643 396 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 OR51S1Q8NGJ8 323 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 ALKBH3Q96Q83 286 aaPredicted RBP18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 NDRG4Q9ULP0 352 aaKnown RBP18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 ZNF724A8MTY0 619 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 C9orf172C9J069 976 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 NPY1RP25929 384 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 LHFPL2Q6ZUX7 228 aa18.51■□□□□ 0.55
CACNA1B-201ENST00000277549 TGIF2LYQ8IUE0 185 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 FGF14Q92915 247 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 CLEC2DQ9UHP7 191 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 DOK3Q7L591 496 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 MSL2Q9HCI7 577 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 ZNF195O14628 629 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 NKX2-1P43699 371 aaPredicted RBP18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 FBXO8Q9NRD0 319 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 IGHV3-43A0A0B4J1X8 118 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 IGHV3-43DP0DP04 118 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 C5orf46Q6UWT4 87 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 LOC107986453A0A1B0GWG9 222 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 M0R135 149 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 PPP3CBP16298 524 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 MEOX1P50221 254 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 ZNF799Q96GE5 643 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 GPR84Q9NQS5 396 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 ELAVL1Q15717 326 aaKnown RBP18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 ABHD17CQ6PCB6 329 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 SLC24A4Q8NFF2 622 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 TMEM231Q9H6L2 316 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 POLDIP2Q9Y2S7 368 aa18.5■□□□□ 0.55
CACNA1B-201ENST00000277549 CNR1P21554 472 aa18.49■□□□□ 0.55
CACNA1B-201ENST00000277549 COL19A1Q14993 1142 aa18.49■□□□□ 0.55
CACNA1B-201ENST00000277549 TMEM52BQ4KMG9 183 aa18.49■□□□□ 0.55
CACNA1B-201ENST00000277549 PYCR3Q53H96 274 aa18.49■□□□□ 0.55
CACNA1B-201ENST00000277549 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.49■□□□□ 0.55
CACNA1B-201ENST00000277549 YIPF5Q969M3 257 aa18.49■□□□□ 0.55
CACNA1B-201ENST00000277549 MRGPRX1Q96LB2 322 aa18.49■□□□□ 0.55
CACNA1B-201ENST00000277549 BIRC8Q96P09 236 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms