RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 COL5A1-AS1Q5SY13 56 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CD300LGQ6UXG3 332 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 OLIG3Q7RTU3 272 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 LRP11Q86VZ4 500 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF101Q8IZC7 436 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 OR9K2Q8NGE7 335 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CASTOR1Q8WTX7 329 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 WFDC12Q8WWY7 111 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 MOAP1Q96BY2 351 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CXorf40BQ96DE9 158 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PELI1Q96FA3 418 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 AQP10Q96PS8 301 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 CNTNAP3Q9BZ76 1288 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 ATG10Q9H0Y0 220 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PRM3Q9NNZ6 103 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 VSIG4Q9Y279 399 aa8.31□□□□□ -1.08
PDGFC-201ENST00000274071 PCYT1BQ9Y5K3 369 aaPredicted RBP8.31□□□□□ -1.08
PDGFC-201ENST00000274071 TRAV18A0A075B6X5 111 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ELOA3DA6NLF2 546 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-201ENST00000274071 K7ERQ8 282 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 AQP7O14520 342 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF264O43296 627 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF7P17097 686 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-201ENST00000274071 CHATP28329 748 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 TIA1P31483 386 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDGFC-201ENST00000274071 PRSS3P35030 304 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 FGF8P55075 233 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-201ENST00000274071 SIRPAP78324 504 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 TMEM95Q3KNT9 176 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 NKAIN1Q4KMZ8 207 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 TMEM205Q6UW68 189 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 SLC25A42Q86VD7 318 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 OR1P1Q8NH06 330 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 SF3B5Q9BWJ5 86 aaKnown RBP8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ADGRL4Q9HBW9 690 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 PLSCR2Q9NRY7 297 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 PRAMEF27A3QJZ7 478 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 FCMRO60667 390 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 WNT11O96014 354 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 IL2RAP01589 272 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 LCATP04180 440 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 UMODP07911 640 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 SLC35G6P0C7Q6 338 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF735P0CB33 412 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 CD37P11049 281 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 IL9P15248 144 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 LMO1P25800 156 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 RGRP47804 291 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 CDC34P49427 236 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-201ENST00000274071 UCP3P55916 312 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ACTA2P62736 377 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ACTG2P63267 376 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ACTC1P68032 377 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ACTA1P68133 377 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF616Q08AN1 781 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 AMZ1Q400G9 498 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 LYPLAL1Q5VWZ2 237 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 P4HA3Q7Z4N8 544 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 SERPINA9Q86WD7 417 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 KDM8Q8N371 416 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 LMNTD1Q8N9Z9 388 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 MFSD8Q8NHS3 518 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF563Q8TA94 476 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 C16orf58Q96GQ5 468 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 NMES1Q9C002 83 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 AURKAIP1Q9NWT8 199 aaPredicted RBP8.3□□□□□ -1.08
PDGFC-201ENST00000274071 VAX2Q9UIW0 290 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 SH2B3Q9UQQ2 575 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 ETV7Q9Y603 341 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 FRMPD3Q5JV73 1810 aa8.3□□□□□ -1.08
PDGFC-201ENST00000274071 K7EPK0 472 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 M0QZ24 198 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 HMGN4O00479 90 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 SLC16A8O95907 504 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 RHOQP17081 205 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 FHITP49789 147 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 EFNB2P52799 333 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 ELLP55199 621 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 ACTBP60709 375 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 ACTG1P63261 375 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 DLK1P80370 383 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 MRPL49Q13405 166 aaKnown RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 LEG1Q6P5S2 330 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 Q6ZVU0 165 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 FAM219AQ8IW50 185 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 ZNF619Q8N2I2 560 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 GBGT1Q8N5D6 347 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 FAM71E2Q8N5Q1 922 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 SUMF2Q8NBJ7 301 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 CORO2AQ92828 525 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 RNF2Q99496 336 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 HELZP42694 1942 aaKnown RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 A0A1W2PQ45 241 aaPredicted RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 A0A1W2PQY0 241 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 CCDC85CA6NKD9 419 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 CPSF4LA6NMK7 179 aaKnown RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 CDC42EP2O14613 210 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 PQBP1O60828 265 aaKnown RBP8.29□□□□□ -1.08
PDGFC-201ENST00000274071 CTAG2O75638 210 aa8.29□□□□□ -1.08
PDGFC-201ENST00000274071 SCGB1D1O95968 90 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms