RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 RAP2BP61225 183 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 STK11Q15831 433 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 LYPD8Q6UX82 237 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 BEND4Q6ZU67 534 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 FAM109AQ8N4B1 249 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 ROBO4Q8WZ75 1007 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 NIPAL2Q9H841 368 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 HIF3AQ9Y2N7 669 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 hCG_1807616A0A1W2PRN6 198 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 LGALS8O00214 317 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 STK17BO94768 372 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 VAMP2P63027 116 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 DOC2BQ14184 412 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 EXOSC6Q5RKV6 272 aaKnown RBP13.13□□□□□ -0.31
CNOT9-201ENST00000273064 MOB3CQ70IA8 216 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 SPEM1Q8N4L4 309 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 OR52N5Q8NH56 324 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 C17orf50Q8WW18 174 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 SPTSSAQ969W0 71 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 TM4SF19Q96DZ7 209 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-201ENST00000273064 GPR173Q9NS66 373 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 KCNIP3Q9Y2W7 256 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 MEMO1Q9Y316 297 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 CADP27708 2225 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 TGFBR3LH3BV60 316 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 BET1O15155 118 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 EPHA1P21709 976 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 SSR4P51571 173 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 CAV2P51636 162 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 LUMP51884 338 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-201ENST00000273064 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 SMAD4Q13485 552 aaKnown RBP13.13□□□□□ -0.31
CNOT9-201ENST00000273064 TAF9Q16594 264 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 HRH4Q9H3N8 390 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 ABCA1O95477 2261 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 LILRA5A6NI73 299 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 CXCL13O43927 109 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 FADS1O60427 444 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 MT-ATP6P00846 226 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 M6PRP20645 277 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 OMGP23515 440 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 AVPR2P30518 371 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 MRPS10P82664 201 aaKnown RBP13.13□□□□□ -0.31
CNOT9-201ENST00000273064 BDH1Q02338 343 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 OR6M1Q8NGM8 313 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 NPAP1Q9NZP6 1156 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 KCNS2Q9ULS6 477 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 NLRC5Q86WI3 1866 aa13.13□□□□□ -0.31
CNOT9-201ENST00000273064 SCGNO76038 276 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 S100A6P06703 90 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 FAHP16930 419 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 MAP2K6P52564 334 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 EFNB2P52799 333 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 RSPO4Q2I0M5 234 aaPredicted RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 GABRG1Q8N1C3 465 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 HAVCR1Q96D42 359 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 PPP1R3EQ9H7J1 279 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 DIDO1Q9BTC0 2240 aaKnown RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 MTRF1O75570 445 aaKnown RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 ALOX5APP20292 161 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 S100GP29377 79 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 CX3CR1P49238 355 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 FJX1Q86VR8 437 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 APOBEC4Q8WW27 367 aaKnown RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 WDR89Q96FK6 387 aaPredicted RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 C4orf45Q96LM5 186 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 OR8B4Q96RC9 309 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 C7orf50Q9BRJ6 194 aaKnown RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 PAPOLGQ9BWT3 736 aaKnown RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 UBE2J1Q9Y385 318 aaPredicted RBP13.12□□□□□ -0.31
CNOT9-201ENST00000273064 HEATR5AQ86XA9 2040 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 CELA2AP08217 269 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF141Q15928 474 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 ADGRE4PQ86SQ3 457 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 C20orf196Q8IYI0 205 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 DEFB123Q8N688 67 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 OCIAD1Q9NX40 245 aa13.12□□□□□ -0.31
CNOT9-201ENST00000273064 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 TRPM7Q96QT4 1865 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 FASLGP48023 281 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 CARD18P57730 90 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 NXPH1P58417 271 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 FOXK1P85037 733 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 EXOSC2Q13868 293 aaKnown RBP13.11□□□□□ -0.31
CNOT9-201ENST00000273064 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 C9orf40Q8IXQ3 194 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 AKR7LQ8NHP1 331 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 PRR13Q9NZ81 148 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 PIGLQ9Y2B2 252 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 FNDC1Q4ZHG4 1894 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-201ENST00000273064 PTP4A3O75365 173 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms