RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SDC2P34741 201 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 RPS27P42677 84 aaKnown RBP21.62■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF133P52736 654 aaPredicted RBP21.62■■□□□ 1.05
SSBP4-201ENST00000270061 KCTD18Q6PI47 426 aaPredicted RBP21.62■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF679Q8IYX0 411 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 ZIC4Q8N9L1 334 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 FNDC9Q8TBE3 224 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 TMEM54Q969K7 222 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 MCHR2Q969V1 340 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 AMELYQ99218 206 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 BARHL1Q9BZE3 327 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 AKIP1Q9NQ31 210 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 IKZF2Q9UKS7 526 aa21.62■■□□□ 1.05
SSBP4-201ENST00000270061 PSMD9O00233 223 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 CXCL13O43927 109 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF432O94892 652 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 CRHP06850 196 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 PSMB10P40306 273 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 KIR2DL3P43628 341 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 EIF1AXP47813 144 aaKnown RBP21.61■■□□□ 1.05
SSBP4-201ENST00000270061 INSL4Q14641 139 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 MEP1BQ16820 701 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 FDX2Q6P4F2 183 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 PAMR1Q6UXH9 720 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 OR2M2Q96R28 347 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 PIGMQ9H3S5 423 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 SLCO1C1Q9NYB5 712 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 CLDN25C9JDP6 229 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 TNFSF13O75888 250 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 ABLIM2Q6H8Q1 611 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 LUZP2Q86TE4 346 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 NSMAFQ92636 917 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF385AQ96PM9 386 aaKnown RBP21.61■■□□□ 1.05
SSBP4-201ENST00000270061 ABHD6Q9BV23 337 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 HMG20AQ9NP66 347 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 PAQR5Q9NXK6 330 aaPredicted RBP21.61■■□□□ 1.05
SSBP4-201ENST00000270061 GLTPQ9NZD2 209 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 ING1Q9UK53 422 aaPredicted RBP21.61■■□□□ 1.05
SSBP4-201ENST00000270061 PEX16Q9Y5Y5 336 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 AKAP6Q13023 2319 aa21.61■■□□□ 1.05
SSBP4-201ENST00000270061 ABCA4P78363 2273 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 TMCC2O75069 709 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 QDPRP09417 244 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 FCGR2AP12318 317 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 MTNR1BP49286 362 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 NANOS3P60323 173 aaKnown RBP21.6■■□□□ 1.05
SSBP4-201ENST00000270061 ALKBH1Q13686 389 aaKnown RBP21.6■■□□□ 1.05
SSBP4-201ENST00000270061 EIF2B1Q14232 305 aaKnown RBP21.6■■□□□ 1.05
SSBP4-201ENST00000270061 KCNMB1Q16558 191 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 ACSM3Q53FZ2 586 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 LRFN4Q6PJG9 635 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 TMEM123Q8N131 208 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 CNEP1R1Q8N9A8 125 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 C11orf40Q8WZ69 217 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 MROQ9BYG7 248 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 RNF122Q9H9V4 155 aa21.6■■□□□ 1.05
SSBP4-201ENST00000270061 CRNNQ9UBG3 495 aaPredicted RBP21.6■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF716A6NP11 495 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 GATBO75879 557 aaKnown RBP21.59■■□□□ 1.05
SSBP4-201ENST00000270061 KRTAP10-9P60411 292 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 RPS11P62280 158 aaKnown RBP eCLIP21.59■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF846Q147U1 533 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 C10orf128Q5T292 105 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 CARD17Q5XLA6 110 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 UNQ9370/PRO34162Q6UXP9 181 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 OR52N5Q8NH56 324 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 PHYHIPQ92561 330 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 BORCS5Q969J3 196 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 RBM24Q9BX46 236 aaKnown RBP21.59■■□□□ 1.05
SSBP4-201ENST00000270061 PRRG4Q9BZD6 226 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 WDR12Q9GZL7 423 aaKnown RBP21.59■■□□□ 1.05
SSBP4-201ENST00000270061 ELOVL3Q9HB03 270 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 RCE1Q9Y256 329 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 ZNF281Q9Y2X9 895 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 IQCMA0A1B0GVH7 501 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 CYTIPO60759 359 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 CLEC2LP0C7M8 214 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 CSNK1A1P48729 337 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 MXD1Q05195 221 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 YIF1BQ5BJH7 314 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 DEGS2Q6QHC5 323 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 CEACAM19Q7Z692 300 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.59■■□□□ 1.05
SSBP4-201ENST00000270061 OR10H5Q8NGA6 315 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 ST7LQ8TDW4 575 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 RNF128Q8TEB7 428 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 MAP6Q96JE9 813 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 C6orf62Q9GZU0 229 aaPredicted RBP21.59■■□□□ 1.05
SSBP4-201ENST00000270061 CRIM1Q9NZV1 1036 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 FLVCR1Q9Y5Y0 555 aa21.59■■□□□ 1.05
SSBP4-201ENST00000270061 CASKO14936 926 aa21.58■■□□□ 1.04
SSBP4-201ENST00000270061 RPP14O95059 124 aaKnown RBP21.58■■□□□ 1.04
SSBP4-201ENST00000270061 OTPQ5XKR4 325 aa21.58■■□□□ 1.04
SSBP4-201ENST00000270061 PDCD1LG2Q9BQ51 273 aa21.58■■□□□ 1.04
SSBP4-201ENST00000270061 TPK1Q9H3S4 243 aa21.58■■□□□ 1.04
SSBP4-201ENST00000270061 FRRS1LQ9P0K9 344 aa21.58■■□□□ 1.04
SSBP4-201ENST00000270061 CYB5R1Q9UHQ9 305 aa21.58■■□□□ 1.04
SSBP4-201ENST00000270061 MCTS1Q9ULC4 181 aaKnown RBP21.58■■□□□ 1.04
SSBP4-201ENST00000270061 OTOGQ6ZRI0 2925 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 SHISA3A0PJX4 238 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms