RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MRPL15Q9P015 296 aaKnown RBP9.9□□□□□ -0.82
MSH3-201ENST00000265081 VDAC3Q9Y277 283 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 KRTAP27-1Q3LI81 207 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 ZNF528Q3MIS6 628 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 ZNF260Q3ZCT1 412 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 OTPQ5XKR4 325 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 SLC23A3Q6PIS1 610 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 TSSK4Q6SA08 328 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 PNPLA2Q96AD5 504 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 PBOV1Q9GZY1 135 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 OR10A4Q9H209 315 aa9.9□□□□□ -0.82
MSH3-201ENST00000265081 GDF2Q9UK05 429 aaPredicted RBP9.9□□□□□ -0.82
MSH3-201ENST00000265081 TUBAL3A6NHL2 446 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 SHISA8B8ZZ34 492 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 PYCARD-AS1I3L0S3 204 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 LMX1BO60663 402 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 GP1BAP07359 652 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 CD63P08962 238 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 DHPSP49366 369 aaPredicted RBP9.9□□□□□ -0.83
MSH3-201ENST00000265081 ACTBP60709 375 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 ACTG1P63261 375 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 UNC119Q13432 240 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 PCGF3Q3KNV8 242 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 H3F3CQ6NXT2 135 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 UEVLDQ8IX04 471 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 SNAPC3Q92966 411 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 DNAJA3Q96EY1 480 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 TMEM41AQ96HV5 264 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 ASXL3Q9C0F0 2248 aa9.9□□□□□ -0.83
MSH3-201ENST00000265081 FREM3P0C091 2139 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 TMEM269A0A1B0GVZ9 245 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 RPS10-NUDT3A0A1W2PQS6 291 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 TMEM14DPA8MWL7 114 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 H3BUI4 141 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 MPC2O95563 127 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 IGHG1P01857 330 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 HTR2BP41595 481 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 OR4D6Q8NGJ1 314 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 OR1J2Q8NGS2 313 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 SLC7A5P2Q9GIP4 190 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 CDCP1Q9H5V8 836 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 KMT2EQ8IZD2 1858 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 FOXI3A8MTJ6 420 aaPredicted RBP9.89□□□□□ -0.83
MSH3-201ENST00000265081 NAT1P18440 290 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 PRSS3P35030 304 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 ALDH3B1P43353 468 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 GNG2P59768 71 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 LSM6P62312 80 aaKnown RBP9.89□□□□□ -0.83
MSH3-201ENST00000265081 GLYATL3Q5SZD4 288 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 TMEM123Q8N131 208 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 ANGPTL6Q8NI99 470 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 FOXD3Q9UJU5 478 aaPredicted RBP9.89□□□□□ -0.83
MSH3-201ENST00000265081 ZNF222Q9UK12 451 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 PLEKHA6Q9Y2H5 1048 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 NCKAP5O14513 1909 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 KIF26BQ2KJY2 2108 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 HMSDA8MTL9 139 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 ZNF878C9JN71 531 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 LIFP15018 202 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 OTX1P32242 354 aaPredicted RBP9.89□□□□□ -0.83
MSH3-201ENST00000265081 TAS2R19P59542 299 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 RAP2BP61225 183 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 ZMYND11Q15326 602 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 FAAP20Q6NZ36 180 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 LINC00346Q8IVM7 164 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 GABRG1Q8N1C3 465 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 NABP1Q96AH0 204 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 C5orf34Q96MH7 638 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 METTL7AQ9H8H3 244 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 FSCN3Q9NQT6 498 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 RAB22AQ9UL26 194 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 HS3ST3B1Q9Y662 390 aa9.89□□□□□ -0.83
MSH3-201ENST00000265081 B4E171 279 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 RAB27BO00194 218 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 CREBL2O60519 120 aaPredicted RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 ANXA7P20073 488 aaKnown RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 HOXD11P31277 338 aaPredicted RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 TSPAN7P41732 249 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 SLC35A1P78382 337 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 GUCA2AQ02747 115 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 PMPCAQ10713 525 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 FAM69BQ5VUD6 431 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 UTS2BQ765I0 119 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 OR2W3Q7Z3T1 314 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 LUZP2Q86TE4 346 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 BEST4Q8NFU0 473 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 THAP3Q8WTV1 239 aaPredicted RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 MRGPRFQ96AM1 343 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 ADAT3Q96EY9 351 aaPredicted RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 WBP1Q96G27 269 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 SEC22CQ9BRL7 303 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 GPN1Q9HCN4 374 aaPredicted RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 KLK13Q9UKR3 277 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 OR14I1A6ND48 311 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 AGRPO00253 132 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 DNPH1O43598 174 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 ZIC3O60481 467 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 H2BFMP0C1H6 154 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 ACP1P24666 158 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 CALCRP30988 508 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms