RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RPRD1BQ9NQG5 326 aaKnown RBP13.64□□□□□ -0.23
USE1-201ENST00000263897 IL20Q9NYY1 176 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 POLR1DQ9Y2S0 133 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 WIPI2Q9Y4P8 454 aa13.64□□□□□ -0.23
USE1-201ENST00000263897 J3QW42 95 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 MSMBP08118 114 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 ANPEPP15144 967 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 RGS6P49758 472 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 RSPO1Q2MKA7 263 aaPredicted RBP13.63□□□□□ -0.23
USE1-201ENST00000263897 SLC36A3Q495N2 470 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 SPRNQ5BIV9 151 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 ZNF770Q6IQ21 691 aaPredicted RBP13.63□□□□□ -0.23
USE1-201ENST00000263897 RPL13AP3Q6NVV1 102 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 CORO6Q6QEF8 472 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 OR9Q2Q8NGE9 314 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 OR52E2Q8NGJ4 325 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 OR5L1Q8NGL2 311 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 POP5Q969H6 163 aaKnown RBP13.63□□□□□ -0.23
USE1-201ENST00000263897 TMEM186Q96B77 213 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 TIMD4Q96H15 378 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 DDOQ99489 341 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 COQ7Q99807 217 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 HDHD2Q9H0R4 259 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 ZNF665Q9H7R5 613 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 TAS2R1Q9NYW7 299 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 CDH10Q9Y6N8 788 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 DYSFO75923 2080 aa13.63□□□□□ -0.23
USE1-201ENST00000263897 BHLHE40O14503 412 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 CCNB2O95067 398 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 RAC2P15153 192 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 TNFAIP6P98066 277 aaPredicted RBP13.62□□□□□ -0.23
USE1-201ENST00000263897 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.62□□□□□ -0.23
USE1-201ENST00000263897 SLC3A1Q07837 685 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 PPP1R8Q12972 351 aaKnown RBP13.62□□□□□ -0.23
USE1-201ENST00000263897 CLEC12AQ5QGZ9 265 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 ZNF362Q5T0B9 420 aaPredicted RBP13.62□□□□□ -0.23
USE1-201ENST00000263897 ACSM5Q6NUN0 579 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 FBXW12Q6X9E4 464 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 Q6ZR03 302 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 RASSF6Q6ZTQ3 369 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 SDR9C7Q8NEX9 313 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 OR52L1Q8NGH7 329 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 OR51F2Q8NH61 342 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 APOBEC3DQ96AK3 386 aaPredicted RBP13.62□□□□□ -0.23
USE1-201ENST00000263897 CDADC1Q9BWV3 514 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 C1orf21Q9H246 121 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 FN3KQ9H479 309 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 LPAR2Q9HBW0 351 aa13.62□□□□□ -0.23
USE1-201ENST00000263897 PRPF19Q9UMS4 504 aaKnown RBP13.62□□□□□ -0.23
USE1-201ENST00000263897 DEAF1O75398 565 aaPredicted RBP13.61□□□□□ -0.23
USE1-201ENST00000263897 HLA-DQA2P01906 255 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 GGT2P36268 569 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 HLXQ14774 488 aaPredicted RBP13.61□□□□□ -0.23
USE1-201ENST00000263897 MICAQ29983 383 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 FAM98BQ52LJ0 330 aaKnown RBP13.61□□□□□ -0.23
USE1-201ENST00000263897 OR2T5Q6IEZ7 315 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 SLC18B1Q6NT16 456 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 OR2Z1Q8NG97 314 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 OR2AJ1Q8NGZ0 328 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 OR2T29Q8NH02 315 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 RAB39BQ96DA2 213 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 PLA2G12AQ9BZM1 189 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 VNN3Q9NY84 501 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 CYB5R1Q9UHQ9 305 aa13.61□□□□□ -0.23
USE1-201ENST00000263897 TANC2Q9HCD6 1990 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 TRAV20A0A0B4J274 112 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 IGHV2-5P01817 119 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 TNFRSF1AP19438 455 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 TNFSF4P23510 183 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 SRP14P37108 136 aaKnown RBP13.6□□□□□ -0.23
USE1-201ENST00000263897 ERFP50548 548 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 ECH1Q13011 328 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 KRTAP27-1Q3LI81 207 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 CFAP77Q6ZQR2 320 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 COLCA1Q6ZS62 124 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 PEG10Q86TG7 708 aaKnown RBP13.6□□□□□ -0.23
USE1-201ENST00000263897 LINC00346Q8IVM7 164 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 PHC2Q8IXK0 858 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 CYB561A3Q8NBI2 242 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 AQP11Q8NBQ7 271 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 OR8D4Q8NGM9 314 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 ASB9Q96DX5 294 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 PITX2Q99697 317 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 DGCR6LQ9BY27 220 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 REEP1Q9H902 201 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 MRPL22Q9NWU5 206 aaKnown RBP13.6□□□□□ -0.23
USE1-201ENST00000263897 PTTG3PQ9NZH4 202 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 IL19Q9UHD0 177 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 U3KQV3 271 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 ARHGAP32A7KAX9 2087 aa13.6□□□□□ -0.23
USE1-201ENST00000263897 CUBNO60494 3623 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 SVEP1Q4LDE5 3571 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 ACOT8O14734 319 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 SURF4O15260 269 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 PLPP2O43688 288 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 PYCR1P32322 319 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 OR2T2Q6IF00 324 aa13.59□□□□□ -0.23
USE1-201ENST00000263897 FAHD2BQ6P2I3 314 aaPredicted RBP13.59□□□□□ -0.23
USE1-201ENST00000263897 LNX2Q8N448 690 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms