RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CELA3BP08861 270 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC2A1P11166 492 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 CELP19835 753 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 NR4A1P22736 598 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 APEX1P27695 318 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 TGFBR2P37173 567 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 RIDAP52758 137 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ACTA2P62736 377 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ACTG2P63267 376 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 HGFACQ04756 655 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SNTB1Q13884 538 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 P2RY6Q15077 328 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 TAF13Q15543 124 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ODF4Q2M2E3 257 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC36A2Q495M3 483 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 NRN1LQ496H8 165 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 FAM220AQ7Z4H9 259 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 MRGPRGQ86SM5 289 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 MYPOPQ86VE0 399 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SYS1Q8N2H4 156 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 PRSS35Q8N3Z0 413 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 OR13F1Q8NGS4 319 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 FCGR1BQ92637 280 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 S100PBPQ96BU1 408 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC17A5Q9NRA2 495 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 GALNT8Q9NY28 637 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 JKAMPQ9P055 326 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ST6GALNAC2Q9UJ37 374 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ERRFI1Q9UJM3 462 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 GTF2A1LQ9UNN4 478 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC22A13Q9Y226 551 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 FAM208BQ5VWN6 2430 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 HEATR1Q9H583 2144 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 LOC100509620A0A075B734 347 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF878C9JN71 531 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SRSF10O75494 262 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SULT1C4O75897 302 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 TACSTD2P09758 323 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 IL32P24001 234 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 HSD11B1P28845 292 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 CCKARP32238 428 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 KIR3DL2P43630 455 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 HTR5AP47898 357 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 GBX2P52951 348 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 UBE2NP61088 152 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 PCBD1P61457 104 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 RPS25P62851 125 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC3A1Q07837 685 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SCRN3Q0VDG4 424 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 MLLT11Q13015 90 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 RAB35Q15286 201 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 GPR107Q5VW38 600 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ARL9Q6T311 187 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 KCTD20Q7Z5Y7 419 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 GPR141Q7Z602 305 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 SYT9Q86SS6 491 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF584Q8IVC4 421 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 RDH10Q8IZV5 341 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 OR1F12Q8NHA8 337 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 TMEM203Q969S6 136 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 YIPF6Q96EC8 236 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 MRPL48Q96GC5 212 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF75AQ96N20 296 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 ATF6BQ99941 703 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 TRIM36Q9NQ86 728 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 FRRS1LQ9P0K9 344 aa8.48□□□□□ -1.05
SNRNP40-201ENST00000263694 TRBV2A0A0J9YWF9 115 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 A0A1B0GUH1 482 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 TMEM269A0A1B0GVZ9 245 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 OR6C6A6NF89 314 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 OGG1O15527 345 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 ZG16O60844 167 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 CD36P16671 472 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 CPEP16870 476 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 CCNOP22674 350 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 GADD45AP24522 165 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 GRNP28799 593 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 CHRNB4P30926 498 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 ARR3P36575 388 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 MAGEB1P43366 347 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 RGS6P49758 472 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF121P58317 390 aaPredicted RBP8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 ACSM1Q08AH1 577 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 TPBGQ13641 420 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 INSL4Q14641 139 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 GSG1Q2KHT4 349 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 C4orf17Q53FE4 359 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 WDR38Q5JTN6 314 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 TMEM53Q6P2H8 277 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 PHC2Q8IXK0 858 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF283Q8N7M2 679 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 OR13C5Q8NGS8 318 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 OR2G2Q8NGZ5 317 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 RPL3LQ92901 407 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 DCLRE1CQ96SD1 692 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 PDCD1LG2Q9BQ51 273 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 TMED9Q9BVK6 235 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 FUNDC2Q9BWH2 189 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 ACTR6Q9GZN1 396 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms