RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 BEX1Q9HBH7 125 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 V9GY05 133 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 LOC400499M0QZD8 3231 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 KHDRBS3O75525 346 aaKnown RBP12.08□□□□□ -0.48
VMP1-201ENST00000262291 RGS11O94810 467 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 TMIGD3P0DMS9 266 aaPredicted RBP12.08□□□□□ -0.48
VMP1-201ENST00000262291 ZNF43P17038 809 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 STARP49675 285 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 RIDAP52758 137 aaKnown RBP12.08□□□□□ -0.48
VMP1-201ENST00000262291 CLDN17P56750 224 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 HES3Q5TGS1 186 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
VMP1-201ENST00000262291 ZNF416Q9BWM5 594 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 AUNIPQ9H7T9 357 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 SDHAF2Q9NX18 166 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
VMP1-201ENST00000262291 CYB5R1Q9UHQ9 305 aa12.08□□□□□ -0.48
VMP1-201ENST00000262291 CNOT1A5YKK6 2376 aaKnown RBP12.07□□□□□ -0.48
VMP1-201ENST00000262291 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 TRAPPC6AO75865 159 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 ACER2Q5QJU3 275 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 SPINK14Q6IE38 97 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 PLXDC2Q6UX71 529 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 NHLRC1Q6VVB1 395 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 GPR148Q8TDV2 347 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 RNF128Q8TEB7 428 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 ZC3HAV1LQ96H79 300 aaKnown RBP12.07□□□□□ -0.48
VMP1-201ENST00000262291 THOC3Q96J01 351 aaKnown RBP12.07□□□□□ -0.48
VMP1-201ENST00000262291 CXorf58Q96LI9 332 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 DEPPQ9NTK1 212 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 IL17BQ9UHF5 180 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 POLR1DQ9Y2S0 133 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 PCDHGA5Q9Y5G8 931 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 PINLYPA6NC86 204 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 TMEM212A6NML5 194 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 SLC2A1P11166 492 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 ANOS1P23352 680 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 DLX5P56178 289 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 METAP1DQ6UB28 335 aaPredicted RBP12.07□□□□□ -0.48
VMP1-201ENST00000262291 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 OR10H5Q8NGA6 315 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 OR6S1Q8NH40 331 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 ST7LQ8TDW4 575 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 HES7Q9BYE0 225 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 GSX2Q9BZM3 304 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 RANBP3Q9H6Z4 567 aaPredicted RBP12.07□□□□□ -0.48
VMP1-201ENST00000262291 OR5V1Q9UGF6 321 aa12.07□□□□□ -0.48
VMP1-201ENST00000262291 PCDHGA9Q9Y5G4 932 aaKnown RBP12.07□□□□□ -0.48
VMP1-201ENST00000262291 hCG_1807616A0A1W2PRN6 198 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ANXA2P2A6NMY6 339 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 CD1AP06126 327 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ANXA2P07355 339 aaKnown RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 CYC1P08574 325 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ZP3P21754 424 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 GPR176Q14439 515 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ATP1A1-AS1Q5TC04 95 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ASPHD2Q6ICH7 369 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 KCTD18Q6PI47 426 aaPredicted RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 TMPPEQ6ZT21 453 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 GLB1L2Q8IW92 636 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 GTPBP8Q8N3Z3 284 aaPredicted RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 PLPP7Q8NBV4 271 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ASB17Q8WXJ9 295 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 RFT1Q96AA3 541 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 SLC25A38Q96DW6 304 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ZNF385AQ96PM9 386 aaKnown RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 SHARPINQ9H0F6 387 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 SH2D2AQ9NP31 389 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 SPATA2Q9UM82 520 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 A0A0J9YW62 118 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 A0A1W2PNV4 684 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 AIPO00170 330 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 P2RY10O00398 339 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 PHYHO14832 338 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ZNF254O75437 659 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 TNFSF15O95150 251 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 WDPCPO95876 746 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 P04436 131 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 QDPRP09417 244 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 PGA4P0DJD7 388 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 PGA3P0DJD8 388 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ANXA3P12429 323 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 STOMP27105 288 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 RBMS1P29558 406 aaKnown RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 EIF1P41567 113 aaKnown RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 SSPNQ14714 243 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 RSPO4Q2I0M5 234 aaPredicted RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 DNM1P34Q6PK57 102 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 ZNF227Q86WZ6 799 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 OR14L1PQ8NHC6 308 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 MNTQ99583 582 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 C12orf57Q99622 126 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 MRPL13Q9BYD1 178 aaKnown RBP12.06□□□□□ -0.48
VMP1-201ENST00000262291 TMEM9BQ9NQ34 198 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 PCDHB16Q9NRJ7 776 aa12.06□□□□□ -0.48
VMP1-201ENST00000262291 PLA2G3Q9NZ20 509 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms