RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 FAM122AQ96E09 287 aa11.05□□□□□ -0.64
SPG11-201ENST00000261866 COLQQ9Y215 455 aaPredicted RBP11.05□□□□□ -0.64
SPG11-201ENST00000261866 FBXO7Q9Y3I1 522 aa11.05□□□□□ -0.64
SPG11-201ENST00000261866 ASB4Q9Y574 426 aa11.05□□□□□ -0.64
SPG11-201ENST00000261866 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.05□□□□□ -0.64
SPG11-201ENST00000261866 NCBP2LA6PVI3 153 aaKnown RBP11.04□□□□□ -0.64
SPG11-201ENST00000261866 M0R135 149 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SLC16A6O15403 523 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SOD1P00441 154 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 TBCEQ15813 527 aaPredicted RBP11.04□□□□□ -0.64
SPG11-201ENST00000261866 LIPNQ5VXI9 398 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SPINK14Q6IE38 97 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 H2BFWTQ7Z2G1 175 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 OR2A1Q8NGT9 310 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 ZNF799Q96GE5 643 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 RPS16P62249 146 aaKnown RBP11.04□□□□□ -0.64
SPG11-201ENST00000261866 FZD2Q14332 565 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 DLEU7Q6UYE1 221 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 GPR78Q96P69 363 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 FYTTD1Q96QD9 318 aaKnown RBP11.04□□□□□ -0.64
SPG11-201ENST00000261866 DHRS9Q9BPW9 319 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 PLK3Q9H4B4 646 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 EXO1Q9UQ84 846 aaKnown RBP11.04□□□□□ -0.64
SPG11-201ENST00000261866 H3BMH7 237 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 GDPGP1Q6ZNW5 385 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 NOXA1Q86UR1 476 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SEC22CQ9BRL7 303 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 LMO7DNF2Z398 122 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 IGLV3-25P01717 112 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 CPT2P23786 658 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 ZMAT1Q5H9K5 638 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 TMEM81Q6P7N7 255 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 CREB3L2Q70SY1 520 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SSX7Q7RTT5 188 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 ADGRE4PQ86SQ3 457 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 GLCCI1Q86VQ1 547 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 OR1J1Q8NGS3 322 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 IER2Q9BTL4 223 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 LAT2Q9GZY6 243 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 EVA1AQ9H8M9 152 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 MED17Q9NVC6 651 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 TAS2R5Q9NYW4 299 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SCO1O75880 301 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SPI1P17947 270 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 PI3P19957 117 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 PPICP45877 212 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 RAB11AP62491 216 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 STEAP1BQ6NZ63 245 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 NCCRP1Q6ZVX7 275 aaPredicted RBP11.04□□□□□ -0.64
SPG11-201ENST00000261866 OR2Z1Q8NG97 314 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 KIAA1456Q9P272 454 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SLCO1B1Q9Y6L6 691 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 HLA-DOBP13765 273 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 RBP2P50120 134 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 CLN3Q13286 438 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 TP53I13Q8NBR0 393 aaPredicted RBP11.04□□□□□ -0.64
SPG11-201ENST00000261866 NT5DC2Q9H857 520 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 P4HTMQ9NXG6 502 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 SLC25A37Q9NYZ2 338 aa11.04□□□□□ -0.64
SPG11-201ENST00000261866 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 TGFBR1P36897 503 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 CYHR1Q6ZMK1 362 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 TMPRSS11FQ6ZWK6 438 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 PTDSS2Q9BVG9 487 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 DUSP22Q9NRW4 184 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 SLC17A4Q9Y2C5 497 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 NPTNQ9Y639 398 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 LAMA4Q16363 1823 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 IGHV1OR15-9A0A0B4J2B8 117 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 ABCD4O14678 606 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 WDR1O75083 606 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 GNG10P50151 68 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 PPT1P50897 306 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 ACSM1Q08AH1 577 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 SELENBP1Q13228 472 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 AMER3Q8N944 861 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 SLC25A43Q8WUT9 341 aaPredicted RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 C1QTNF3Q9BXJ4 246 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 RIMS4Q9H426 269 aaPredicted RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 OCIAD1Q9NX40 245 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 DCAF16Q9NXF7 216 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 C17orf112F2Z3M2 114 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 SH2D1BO14796 132 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 NRASP01111 189 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 NAGAP17050 411 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 HTR4Q13639 388 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 RBMS2Q15434 407 aaKnown RBP11.03□□□□□ -0.64
SPG11-201ENST00000261866 ZNF74Q16587 644 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 PRAMEF5Q5TYX0 476 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 PRAMEF6Q5VXH4 476 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 MZB1Q8WU39 189 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 IGHV3-13P01766 116 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 IGHV3-7P01780 117 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 HTN1P15515 57 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 SLC6A12P48065 614 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 BAMBIQ13145 260 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 DBX2Q6ZNG2 339 aa11.03□□□□□ -0.64
SPG11-201ENST00000261866 NRARPQ7Z6K4 114 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms