RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 OR5H15A6NDH6 313 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 DHHO43323 396 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 NME2P1O60361 137 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 MAS1P04201 325 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 SP1P08047 785 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 NME2P22392 152 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 SELENOPP49908 381 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 CCL11P51671 97 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 CLDN15P56746 228 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 PITPNAQ00169 270 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 FDCSPQ8NFU4 85 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 NELFAQ9H3P2 528 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 CAMK2AQ9UQM7 478 aa24.45■■□□□ 1.51
CCM2-201ENST00000258781 HNRNPCP07910 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
CCM2-201ENST00000258781 PSMA6P60900 246 aaKnown RBP24.45■■□□□ 1.5
CCM2-201ENST00000258781 ELMOD2Q8IZ81 293 aa24.45■■□□□ 1.5
CCM2-201ENST00000258781 CKLFQ9UBR5 152 aa24.45■■□□□ 1.5
CCM2-201ENST00000258781 CLEC4AQ9UMR7 237 aa24.45■■□□□ 1.5
CCM2-201ENST00000258781 INPP1P49441 399 aa24.44■■□□□ 1.5
CCM2-201ENST00000258781 HACD4Q5VWC8 232 aa24.44■■□□□ 1.5
CCM2-201ENST00000258781 SLC25A25Q6KCM7 469 aa24.44■■□□□ 1.5
CCM2-201ENST00000258781 OR13C3Q8NGS6 347 aa24.44■■□□□ 1.5
CCM2-201ENST00000258781 ULBP2Q9BZM5 246 aa24.44■■□□□ 1.5
CCM2-201ENST00000258781 PNRC2Q9NPJ4 139 aaKnown RBP24.44■■□□□ 1.5
CCM2-201ENST00000258781 OR5V1Q9UGF6 321 aa24.44■■□□□ 1.5
CCM2-201ENST00000258781 HSD11B1P28845 292 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 ZNF84P51523 738 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 SGCAQ16586 387 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 CMTM4Q8IZR5 234 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 DNAAF1Q8NEP3 725 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 RFT1Q96AA3 541 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 SLC25A38Q96DW6 304 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 ABHD1Q96SE0 405 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 ZNF416Q9BWM5 594 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 NUFIP1Q9UHK0 495 aaKnown RBP24.43■■□□□ 1.5
CCM2-201ENST00000258781 A0A1B0GVC2 190 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 A6NIN4 97 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 CYTIPO60759 359 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 GLSO94925 669 aaPredicted RBP24.43■■□□□ 1.5
CCM2-201ENST00000258781 IGFBP3P17936 291 aaPredicted RBP24.43■■□□□ 1.5
CCM2-201ENST00000258781 TAF13Q15543 124 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 HYAL4Q2M3T9 481 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 ASPHD2Q6ICH7 369 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 MZT2BQ6NZ67 158 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 ROBO4Q8WZ75 1007 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 TRIM63Q969Q1 353 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 NABP1Q96AH0 204 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 NEDD4LQ96PU5 975 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 PBOV1Q9GZY1 135 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 ABCG5Q9H222 651 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 STEAP1Q9UHE8 339 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 KCNMB2Q9Y691 235 aa24.43■■□□□ 1.5
CCM2-201ENST00000258781 ANKRD11Q6UB99 2663 aaPredicted RBP24.43■■□□□ 1.5
CCM2-201ENST00000258781 IGF2RP11717 2491 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 KLRC4-KLRK1H3BQV0 150 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 TTRP02766 147 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 RFC3P40938 356 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 MAP2K3P46734 347 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 FCRLAQ7L513 359 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 DTX3Q8N9I9 347 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 RAB40AQ8WXH6 277 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 THAP7Q9BT49 309 aaPredicted RBP24.42■■□□□ 1.5
CCM2-201ENST00000258781 HDHD2Q9H0R4 259 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 SSUH2Q9Y2M2 353 aa24.42■■□□□ 1.5
CCM2-201ENST00000258781 URB1O60287 2271 aaKnown RBP24.42■■□□□ 1.5
CCM2-201ENST00000258781 ACSM4P0C7M7 580 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 CD46P15529 392 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 LHX2P50458 406 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 MMP15P51511 669 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 CLDN12P56749 244 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 GRB2P62993 217 aaKnown RBP24.41■■□□□ 1.5
CCM2-201ENST00000258781 PLGLB1Q02325 96 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 TMEM251Q8N6I4 163 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 CELF2-AS1Q8N7Q2 184 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 ZC3HAV1LQ96H79 300 aaKnown RBP24.41■■□□□ 1.5
CCM2-201ENST00000258781 NCOA6Q14686 2063 aaPredicted RBP24.41■■□□□ 1.5
CCM2-201ENST00000258781 FAM166BA8MTA8 275 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 P2RY10O00398 339 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 CTDSPLO15194 276 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 RER1O15258 196 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 CELA3AP09093 270 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 MAGEA5P43359 124 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 MEOX1P50221 254 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 ENDOGQ14249 297 aaKnown RBP24.41■■□□□ 1.5
CCM2-201ENST00000258781 GALNTL5Q7Z4T8 443 aa24.41■■□□□ 1.5
CCM2-201ENST00000258781 RBM24Q9BX46 236 aaKnown RBP24.41■■□□□ 1.5
CCM2-201ENST00000258781 DDX28Q9NUL7 540 aaKnown RBP24.41■■□□□ 1.5
CCM2-201ENST00000258781 CD37P11049 281 aa24.4■■□□□ 1.5
CCM2-201ENST00000258781 MRPS34P82930 218 aaKnown RBP24.4■■□□□ 1.5
CCM2-201ENST00000258781 AAED1Q7RTV5 226 aa24.4■■□□□ 1.5
CCM2-201ENST00000258781 GJC3Q8NFK1 279 aa24.4■■□□□ 1.5
CCM2-201ENST00000258781 RBFOX1Q9NWB1 397 aaKnown RBP24.4■■□□□ 1.5
CCM2-201ENST00000258781 TAS2R4Q9NYW5 299 aa24.4■■□□□ 1.5
CCM2-201ENST00000258781 NCOR2Q9Y618 2525 aa24.4■■□□□ 1.5
CCM2-201ENST00000258781 BOD1L1Q8NFC6 3051 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 MEGF11A6BM72 1044 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 LYRM1O43325 122 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 HIST1H3AP68431 136 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 HIST2H3PS2Q5TEC6 136 aa24.39■■□□□ 1.5
CCM2-201ENST00000258781 HIST2H3AQ71DI3 136 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms