RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NEK7Q8TDX7 302 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CMTM3Q96MX0 182 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 GFI1Q99684 422 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 URM1Q9BTM9 101 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 BCL2L14Q9BZR8 327 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 FGF21Q9NSA1 209 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PRR13Q9NZ81 148 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PIPOXQ9P0Z9 390 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PCOLCE2Q9UKZ9 415 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CSAG2Q9Y5P2 127 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 HS3ST3A1Q9Y663 406 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 HELZP42694 1942 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 LOC105371267A0A1B0GV96 52 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 A0A1W2PNR3 127 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 TLCD2A6NGC4 264 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RFPL4AA6NLU0 287 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RFPL4AL1F8VTS6 287 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 DUX1O43812 170 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 HLA-DOBP13765 273 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 IL32P24001 234 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SERPINF1P36955 418 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 DAP3P51398 398 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 PLAURQ03405 335 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ZNF616Q08AN1 781 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SKP2Q13309 424 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ELAVL1Q15717 326 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 EMC4Q5J8M3 183 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 GLIPR1L1Q6UWM5 242 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 UNQ9370/PRO34162Q6UXP9 181 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 GRINAQ7Z429 371 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 LRRTM1Q86UE6 522 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 UEVLDQ8IX04 471 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 STPG2Q8N412 459 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ARL11Q969Q4 196 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RAB3CQ96E17 227 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ARL5BQ96KC2 179 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ZNF578Q96N58 590 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 GABRG3Q99928 467 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 KLHDC3Q9BQ90 382 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 AIFM2Q9BRQ8 373 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 TMEM59Q9BXS4 323 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 LAT2Q9GZY6 243 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 TXNIPQ9H3M7 391 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 C1orf198Q9H425 327 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 EHFQ9NZC4 300 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 GLS2Q9UI32 602 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 C14orf166Q9Y224 244 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 LSM5Q9Y4Y9 91 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 CHD7Q9P2D1 2997 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 KIF26BQ2KJY2 2108 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 A6NIZ1 184 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 G3V3Y1 287 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SLC33A1O00400 549 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 CDK2AP1O14519 115 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 LMX1BO60663 402 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 IFNA21P01568 189 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 TMEM225BP0DP42 221 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 TPT1P13693 172 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 NME2P22392 152 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 GABRR1P24046 479 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ABCD3P28288 659 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 CDAP32320 146 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SNU13P55769 128 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 FXYD4P59646 89 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RAP1BP61224 184 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RAP1AP62834 184 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 HYAL1Q12794 435 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SGCBQ16585 318 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MOGAT2Q3SYC2 334 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ABCA11PQ4W5N1 156 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ATPAF1Q5TC12 328 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 PLXDC1Q8IUK5 500 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ZFP82Q8N141 532 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 OR52N4Q8NGI2 321 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RNF128Q8TEB7 428 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ASB5Q8WWX0 329 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MARC2Q969Z3 335 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SEH1LQ96EE3 360 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 CDCA3Q99618 268 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 CDC6Q99741 560 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ZNF426Q9BUY5 554 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RBM24Q9BX46 236 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 LMAN1LQ9HAT1 526 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 NPDC1Q9NQX5 325 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 ASH2LQ9UBL3 628 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MMP17Q9ULZ9 603 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MRPS28Q9Y2Q9 187 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 MEMO1Q9Y316 297 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MRPS18BQ9Y676 258 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 FRMPD3Q5JV73 1810 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 A0A0A6YYH2 397 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 TRBV11-1A0A0K0K1C0 115 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SLC22A23A1A5C7 686 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 A6NJ64 397 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MT-ATP6P00846 226 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SERPINA5P05154 406 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ABOP16442 354 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MGMTP16455 207 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 NAGAP17050 411 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms