RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ALKBH3Q96Q83 286 aaPredicted RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 DIRC2Q96SL1 478 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 GPR21Q99679 349 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 SLC25A21Q9BQT8 299 aaPredicted RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 IL17CQ9P0M4 197 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 IL19Q9UHD0 177 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF292O60281 2723 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 A0A1W2PQU0 124 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 UPK3BL1B0FP48 263 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 UPK3BL2E5RIL1 263 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 H7BY64 318 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 KCNAB3O43448 404 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 TSPAN6O43657 245 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 NUDT21O43809 227 aaKnown RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 SLCO2B1O94956 709 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 CD1AP06126 327 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 NBEAP1P0C6P0 100 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ELAVL4P26378 380 aaKnown RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 SLC37A1P57057 533 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 H3F3AP84243 136 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 SLC25A35Q3KQZ1 300 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 KHDRBS2Q5VWX1 349 aaKnown RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 SLC23A3Q6PIS1 610 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 CEACAM19Q7Z692 300 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 GLB1L2Q8IW92 636 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ACOT4Q8N9L9 421 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 OR4K17Q8NGC6 315 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ARRDC2Q8TBH0 407 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 S100A16Q96FQ6 103 aaKnown RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 TMEM19Q96HH6 336 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ADAD1Q96M93 576 aaKnown RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 PHB2Q99623 299 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 PCBD2Q9H0N5 130 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 CYTL1Q9NRR1 136 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 FOXJ2Q9P0K8 574 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF346Q9UL40 294 aaKnown RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ANGPT4Q9Y264 503 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 ETV7Q9Y603 341 aa10.68□□□□□ -0.7
CCNA1-201ENST00000255465 TDRD6O60522 2096 aaKnown RBP10.68□□□□□ -0.7
CCNA1-201ENST00000255465 TRAV39A0A0B4J263 110 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 PRAMEF25A6NGN4 478 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 ITGB2P05107 769 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 CFIP05156 583 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 H1F0P07305 194 aaKnown RBP10.67□□□□□ -0.7
CCNA1-201ENST00000255465 IRF2P14316 349 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 ATF1P18846 271 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 HSD11B1P28845 292 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 HTR1FP30939 366 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 P2RX1P51575 399 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 POLR2LP62875 67 aaKnown RBP10.67□□□□□ -0.7
CCNA1-201ENST00000255465 RPS21P63220 83 aaKnown RBP10.67□□□□□ -0.7
CCNA1-201ENST00000255465 CYCSP99999 105 aaKnown RBP10.67□□□□□ -0.7
CCNA1-201ENST00000255465 HSF1Q00613 529 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 CBFBQ13951 182 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 TAF13Q15543 124 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 RPE65Q16518 533 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 GGTA1PQ4G0N0 100 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 TCTN3Q6NUS6 607 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 GRINAQ7Z429 371 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 MRPL41Q8IXM3 137 aaKnown RBP10.67□□□□□ -0.7
CCNA1-201ENST00000255465 GABRG1Q8N1C3 465 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 SLC35G3Q8N808 338 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 NAXEQ8NCW5 288 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 OR4S1Q8NGB4 309 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 OR5AK2Q8NH90 309 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 ABHD4Q8TB40 342 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 TMED6Q8WW62 240 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 KLK6Q92876 244 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 RAB39BQ96DA2 213 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF845Q96IR2 970 aaPredicted RBP10.67□□□□□ -0.7
CCNA1-201ENST00000255465 PRRT1Q99946 306 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 ACTRT3Q9BYD9 372 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF337Q9Y3M9 751 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF106Q9H2Y7 1883 aaKnown RBP10.67□□□□□ -0.7
CCNA1-201ENST00000255465 SCN8AQ9UQD0 1980 aa10.67□□□□□ -0.7
CCNA1-201ENST00000255465 A0A1W2PPE2 198 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF208O43345 1280 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF432O94892 652 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 MMP2P08253 660 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 OR12D1P0DN82 309 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 CALCBP10092 127 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 SNRPBP14678 240 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 AKR1C3P42330 323 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 PTH2RP49190 550 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 PCBP3P57721 371 aaKnown RBP10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ACTBP60709 375 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ACTA2P62736 377 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ACTG1P63261 375 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ACTG2P63267 376 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ACTC1P68032 377 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ACTA1P68133 377 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 CACNG1Q06432 222 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ODF4Q2M2E3 257 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ALG10BQ5I7T1 473 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 LCTLQ6UWM7 567 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 WDR88Q6ZMY6 472 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 OR5L2Q8NGL0 311 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 OR14L1PQ8NHC6 308 aa10.66□□□□□ -0.7
CCNA1-201ENST00000255465 ZNF671Q8TAW3 534 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms