RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TOMM34Q15785 309 aaPredicted RBP17.19■□□□□ 0.34
PTPRE-201ENST00000254667 TCEAL2Q9H3H9 227 aaPredicted RBP17.19■□□□□ 0.34
PTPRE-201ENST00000254667 POFUT1Q9H488 388 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 TPBGQ13641 420 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 PHLDA2Q53GA4 152 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 CELF2-AS1Q8N7Q2 184 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 SCCPDHQ8NBX0 429 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 CTSFQ9UBX1 484 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 TNFSF11O14788 317 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 S100A11P31949 105 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 B9D1Q9UPM9 204 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 SSX4O60224 188 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 CD1EP15812 388 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 NDUFB7P17568 137 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 TMEM215Q68D42 235 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 PAQR6Q6TCH4 344 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 SAV1Q9H4B6 383 aaPredicted RBP17.19■□□□□ 0.34
PTPRE-201ENST00000254667 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 HSD17B6O14756 317 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 PRICKLE3O43900 615 aaPredicted RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ANXA7P20073 488 aaKnown RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 TBPP20226 339 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 PTAFRP25105 342 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 NFYBP25208 207 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 MRPS34P82930 218 aaKnown RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 CATSPERDQ86XM0 798 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 OR2AE1Q8NHA4 323 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 REEP6Q96HR9 211 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 BTF3L4Q96K17 158 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 FAM173AQ9BQD7 235 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ATP23Q9Y6H3 246 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 TMEM265A0A087WTH1 108 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 HS3ST1O14792 307 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 SCAF4O95104 1147 aaKnown RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 SNRNP70P08621 437 aaKnown RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ALKAL2Q6UX46 152 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 PRSS45Q7RTY3 260 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ZNF808Q8N4W9 903 aaPredicted RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 FAM213BQ8TBF2 198 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 FBXO8Q9NRD0 319 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 TGM6O95932 706 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 CRYABP02511 175 aaKnown RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 EIF4EP06730 217 aaKnown RBP17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ELFN2Q5R3F8 820 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 OR2A2Q6IF42 318 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 TMEM179BQ7Z7N9 219 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 MED18Q9BUE0 208 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ZNF355PQ9NSJ1 428 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 A0A1B0GVG6 124 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 IFITM5A6NNB3 132 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 TPPPO94811 219 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 Q6ZNX1 250 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 OR51A4Q8NGJ6 313 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 OR52I2Q8NH67 350 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 TECTBQ96PL2 329 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ZNF385DQ9H6B1 395 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 ERVMER34-1Q9H9K5 563 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 NDRG3Q9UGV2 375 aa17.18■□□□□ 0.34
PTPRE-201ENST00000254667 FABP1P07148 127 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 AGERQ15109 404 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 ZNF718Q3SXZ3 478 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 NOXO1Q8NFA2 376 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 PLK3Q9H4B4 646 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 AGAP14A8MT82 685 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 HSBP1L1C9JCN9 74 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 RPP25Q9BUL9 199 aaKnown RBP17.17■□□□□ 0.34
PTPRE-201ENST00000254667 GDF2Q9UK05 429 aaPredicted RBP17.17■□□□□ 0.34
PTPRE-201ENST00000254667 IGHV1OR21-1A0A087WYE8 117 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 KRBOX1C9JBD0 128 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 SERPINF1P36955 418 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 MPLP40238 635 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 NOVA1P51513 510 aaKnown RBP17.17■□□□□ 0.34
PTPRE-201ENST00000254667 RAE1P78406 368 aaKnown RBP17.17■□□□□ 0.34
PTPRE-201ENST00000254667 COX14Q96I36 57 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 IGHV1OR15-9A0A0B4J2B8 117 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 NXPH1P58417 271 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 SOWAHCQ53LP3 525 aaPredicted RBP17.17■□□□□ 0.34
PTPRE-201ENST00000254667 H2BFWTQ7Z2G1 175 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 SEC22CQ9BRL7 303 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 CFHR5Q9BXR6 569 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 RIMS4Q9H426 269 aaPredicted RBP17.17■□□□□ 0.34
PTPRE-201ENST00000254667 TAS2R5Q9NYW4 299 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 F6UZH7 168 aa17.17■□□□□ 0.34
PTPRE-201ENST00000254667 SUB1P53999 127 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTPRE-201ENST00000254667 OR8U8P0C7N1 319 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 DDOSTP39656 456 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 ZDHHC23Q8IYP9 409 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 HMGCLL1Q8TB92 370 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 FAM234AQ9H0X4 552 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 TRAV17A0A0B4J275 112 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 ST8SIA3O43173 380 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 EFSO43281 561 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 DBPQ10586 325 aaPredicted RBP17.16■□□□□ 0.34
PTPRE-201ENST00000254667 TMPRSS11FQ6ZWK6 438 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 GABRG1Q8N1C3 465 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 OR10K1Q8NGX5 313 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 A4GNTQ9UNA3 340 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
PTPRE-201ENST00000254667 CDK5RAP2Q96SN8 1893 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms