RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 B3GNT2Q9NY97 397 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 PLEK2Q9NYT0 353 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 OSGIN2Q9Y236 505 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 LRP12Q9Y561 859 aa11.32□□□□□ -0.6
LSM8-201ENST00000249299 IGSF10Q6WRI0 2623 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 SPENQ96T58 3664 aaKnown RBP11.31□□□□□ -0.6
LSM8-201ENST00000249299 DPPA5A6NC42 116 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 TMEM212A6NML5 194 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 PRR32B1ATL7 298 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 CCL21O00585 134 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 SYNGR3O43761 229 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 ZNF32P17041 273 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 AGAP20933 346 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 HOXC12P31275 282 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 GABRA5P31644 462 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 LIPAP38571 399 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
LSM8-201ENST00000249299 UBE2NP61088 152 aaKnown RBP11.31□□□□□ -0.6
LSM8-201ENST00000249299 PSG4Q00888 419 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 PLP2Q04941 152 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 TAF13Q15543 124 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 TP53I3Q53FA7 332 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 CCDC92Q53HC0 331 aaPredicted RBP11.31□□□□□ -0.6
LSM8-201ENST00000249299 TIMM23BQ5SRD1 257 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 CD200R1LQ6Q8B3 271 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
LSM8-201ENST00000249299 LRRN1Q6UXK5 716 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 SATL1Q86VE3 508 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 OR10S1Q8NGN2 331 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 OR1F12Q8NHA8 337 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 RAB2BQ8WUD1 216 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 OPN3Q9H1Y3 402 aaPredicted RBP11.31□□□□□ -0.6
LSM8-201ENST00000249299 SLC17A5Q9NRA2 495 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 CENPMQ9NSP4 180 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 COQ3Q9NZJ6 369 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 ZNF224Q9NZL3 707 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 ST6GALNAC2Q9UJ37 374 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 AMDHD2Q9Y303 409 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 R4GMQ9 66 aa11.31□□□□□ -0.6
LSM8-201ENST00000249299 MED12LQ86YW9 2145 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 DOCK7Q96N67 2140 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 COL6A6A6NMZ7 2263 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 OR5H1A6NKK0 313 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 J3QW42 95 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 SRSF10O75494 262 aaKnown RBP11.3□□□□□ -0.6
LSM8-201ENST00000249299 WNT11O96014 354 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 SERPINA3P01011 423 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 PPP3CBP16298 524 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 CD36P16671 472 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 CELP19835 753 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 BMP5P22003 454 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 CRYGSP22914 178 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 HSD11B1P28845 292 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 CD79BP40259 229 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 FOXG1P55316 489 aaPredicted RBP11.3□□□□□ -0.6
LSM8-201ENST00000249299 RAB1AP62820 205 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 ALKBH1Q13686 389 aaKnown RBP11.3□□□□□ -0.6
LSM8-201ENST00000249299 GSG1Q2KHT4 349 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 DRAM2Q6UX65 266 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 ZNF704Q6ZNC4 412 aaPredicted RBP11.3□□□□□ -0.6
LSM8-201ENST00000249299 CCDC54Q8NEL0 328 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 OR2G2Q8NGZ5 317 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 PHYHIPQ92561 330 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 TMIGD2Q96BF3 282 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 LRRC46Q96FV0 321 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 DOK1Q99704 481 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 RBM38Q9H0Z9 239 aaKnown RBP11.3□□□□□ -0.6
LSM8-201ENST00000249299 WNT5BQ9H1J7 359 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 RNF121Q9H920 327 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 ZNF391Q9UJN7 358 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 SLC5A6Q9Y289 635 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 KALRNO60229 2985 aa11.3□□□□□ -0.6
LSM8-201ENST00000249299 TRBV2A0A0J9YWF9 115 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 DOK2O60496 412 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 GABARAPO95166 117 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 LALBAP00709 142 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 SERPINA5P05154 406 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 ISG15P05161 165 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 CBR1P16152 277 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 IL32P24001 234 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 FGF9P31371 208 aaPredicted RBP11.29□□□□□ -0.6
LSM8-201ENST00000249299 TGFBR2P37173 567 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 TPTEP56180 551 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 TLE1Q04724 770 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 SSX1Q16384 188 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 TSTQ16762 297 aaKnown RBP11.29□□□□□ -0.6
LSM8-201ENST00000249299 C4orf17Q53FE4 359 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 PABPC1L2AQ5JQF8 200 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 LIPKQ5VXJ0 399 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 PAMR1Q6UXH9 720 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
LSM8-201ENST00000249299 CXorf67Q86X51 503 aaPredicted RBP11.29□□□□□ -0.6
LSM8-201ENST00000249299 IL17RDQ8NFM7 739 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms