RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MT-ND5P03915 603 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ALPLP05186 524 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 FAM157BP0CG42 384 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 CCL2P13500 99 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 GCH1P30793 250 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 SLC15A1P46059 708 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 PTH2RP49190 550 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 HIST1H3AP68431 136 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 TAF13Q15543 124 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ADIPOQQ15848 244 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 MEP1BQ16820 701 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF718Q3SXZ3 478 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 KLHL12Q53G59 568 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 HIST2H3PS2Q5TEC6 136 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 SLX4IPQ5VYV7 408 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 TMEM236Q5W0B7 351 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 PLBD1Q6P4A8 553 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 CLEC9AQ6UXN8 241 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 HIST2H3AQ71DI3 136 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 CPOQ8IVL8 374 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 OR51L1Q8NGJ5 315 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 SYNPRQ8TBG9 265 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 IGFBPL1Q8WX77 278 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 PTP4A1Q93096 173 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 SPTSSAQ969W0 71 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 MRPL24Q96A35 216 aaKnown RBP9.72□□□□□ -0.85
SF3B6-201ENST00000233468 PERPQ96FX8 193 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 INTS14Q96SY0 518 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 CACNG6Q9BXT2 260 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 RAB1BQ9H0U4 201 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 MS4A5Q9H3V2 200 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 RIBC2Q9H4K1 309 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 DYNLRB1Q9NP97 96 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 TMEFF2Q9UIK5 374 aaPredicted RBP9.72□□□□□ -0.85
SF3B6-201ENST00000233468 GDF2Q9UK05 429 aaPredicted RBP9.72□□□□□ -0.85
SF3B6-201ENST00000233468 LHFPL6Q9Y693 200 aa9.72□□□□□ -0.85
SF3B6-201ENST00000233468 RAI1Q7Z5J4 1906 aaPredicted RBP9.72□□□□□ -0.85
SF3B6-201ENST00000233468 ALPK2Q86TB3 2170 aa9.71□□□□□ -0.85
SF3B6-201ENST00000233468 LOC100509620A0A075B734 347 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 TVP23AA6NH52 213 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SLC22A31A6NKX4 558 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 FAM183AA6NL82 134 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SNTNA6NMZ2 147 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 EI24O14681 340 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SYNGR3O43761 229 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 TLX2O43763 284 aaPredicted RBP9.71□□□□□ -0.86
SF3B6-201ENST00000233468 LY6G6DO95868 133 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 GPANK1O95872 356 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 CD8AP01732 235 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 APOC1P02654 83 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 GYPBP06028 91 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SPARCP09486 303 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 GGT2P36268 569 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 PPOXP50336 477 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 NUDT6P53370 316 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 TPTEP56180 551 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 KLF3P57682 345 aaPredicted RBP9.71□□□□□ -0.86
SF3B6-201ENST00000233468 PCK2Q16822 640 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SWI5Q1ZZU3 235 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 CCDC92Q53HC0 331 aaPredicted RBP9.71□□□□□ -0.86
SF3B6-201ENST00000233468 C11orf71Q6IPW1 123 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SLC18B1Q6NT16 456 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 ERI1Q8IV48 349 aaKnown RBP9.71□□□□□ -0.86
SF3B6-201ENST00000233468 GID4Q8IVV7 300 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 CBR4Q8N4T8 237 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 OR8J1Q8NGP2 316 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 OR1J1Q8NGS3 322 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 ABHD4Q8TB40 342 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 TMEM163Q8TC26 289 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SNX33Q8WV41 574 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 TRUB1Q8WWH5 349 aaKnown RBP9.71□□□□□ -0.86
SF3B6-201ENST00000233468 ATF6BQ99941 703 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 SP140LQ9H930 580 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 MRPL22Q9NWU5 206 aaKnown RBP9.71□□□□□ -0.86
SF3B6-201ENST00000233468 IMPAD1Q9NX62 359 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 DUSP13Q9UII6 198 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 GRIP1Q9Y3R0 1128 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 COMMD3-BMI1R4GMX3 469 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 FBN3Q75N90 2809 aa9.71□□□□□ -0.86
SF3B6-201ENST00000233468 A0A1W2PPW3 197 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 ERICH4A6NGS2 130 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 KIAA1324LA8MWY0 1029 aaPredicted RBP9.7□□□□□ -0.86
SF3B6-201ENST00000233468 M0R233 179 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 VSIG8P0DPA2 414 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF250P15622 560 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 LIPAP38571 399 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 CDKN1AP38936 164 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 DSCR9P59020 149 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 PPP1CBP62140 327 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 NKPD1Q17RQ9 610 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 LINC01590Q5TEZ4 76 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 NXNL2Q5VZ03 156 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 C12orf73Q69YU5 71 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 TMEM154Q6P9G4 183 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 CORO6Q6QEF8 472 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 RHOUQ7L0Q8 258 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 DCXRQ7Z4W1 244 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 LINC00346Q8IVM7 164 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms