RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SPG21Q9NZD8 308 aa7.54□□□□□ -1.2
SPARC-201ENST00000231061 DENND4AQ7Z401 1863 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 TRAV19A0A0A6YYK7 116 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 CA3P07451 260 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 BRS3P32247 399 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 AKR1C1Q04828 323 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 DUSP2Q05923 314 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 UBE2V1Q13404 147 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 RBM39Q14498 530 aaKnown RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 EIPR1Q53HC9 387 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 ADAM5Q6NVV9 412 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 OR9Q2Q8NGE9 314 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 ANKRD9Q96BM1 317 aaPredicted RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 EPYCQ99645 322 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 TMEM121BQ9BXQ6 578 aaPredicted RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 RNF167Q9H6Y7 350 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 IL21Q9HBE4 155 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 MBNL1Q9NR56 388 aaKnown RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 RLIMQ9NVW2 624 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 STOX2Q9P2F5 926 aaPredicted RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 A0A1W2PR48 441 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 LEFTY2O00292 366 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SLC16A8O95907 504 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SEMG1P04279 462 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 PAX1P15863 534 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 GGT2P36268 569 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SLC19A1P41440 591 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 NPBWR1P48145 328 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 UCP3P55916 312 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 CLDN12P56749 244 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 POLR2LP62875 67 aaKnown RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 SPATA46Q5T0L3 261 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 FCRLAQ7L513 359 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 OR9A4Q8NGU2 314 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 ZNF675Q8TD23 568 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SPRYD4Q8WW59 207 aaPredicted RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 FCGR1BQ92637 280 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 PITX2Q99697 317 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 ULBP2Q9BZM5 246 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SLC28A3Q9HAS3 691 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 LYVE1Q9Y5Y7 322 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 IGLV3-16A0A075B6K0 115 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 NPIPB13A6NJU9 1138 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 CLDN24A6NM45 220 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 NPIPB4C9JG80 1138 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 J3KTA2 159 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 DNPH1O43598 174 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 CLEC3AO75596 197 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 TGFB1P01137 390 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 S1PR1P21453 382 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 CDX1P47902 265 aaPredicted RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 TAS2R38P59533 333 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 TAF9Q16594 264 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 IER5LQ5T953 404 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 GRHL2Q6ISB3 625 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SPRED2Q7Z698 418 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 OR8I2Q8N0Y5 310 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 LRRC75AQ8NAA5 344 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 OR2T4Q8NH00 348 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 GGHQ92820 318 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 HSPA12BQ96MM6 686 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 OR2A14Q96R47 310 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 OR51E2Q9H255 320 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SLC25A32Q9H2D1 315 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 EXOSC4Q9NPD3 245 aaKnown RBP7.53□□□□□ -1.2
SPARC-201ENST00000231061 TAS2R16Q9NYV7 291 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 LRIT1Q9P2V4 623 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 SLC45A2Q9UMX9 530 aa7.53□□□□□ -1.2
SPARC-201ENST00000231061 CHD3Q12873 2000 aaKnown RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 TGFBR3LH3BV60 316 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 MAGEB4O15481 346 aaPredicted RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 TOXO94900 526 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 DCNP07585 359 aaKnown RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 UGT2B7P16662 529 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 IDSP22304 550 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 TIA1P31483 386 aaKnown RBP eCLIP7.52□□□□□ -1.21
SPARC-201ENST00000231061 HTR4Q13639 388 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 ZNF385BQ569K4 471 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 STEAP1BQ6NZ63 245 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 LRRTM1Q86UE6 522 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 TMEM25Q86YD3 366 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 PDZD9Q8IXQ8 264 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 SDR9C7Q8NEX9 313 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 OR11H4Q8NGC9 324 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 SORCS1Q8WY21 1168 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 PPCDCQ96CD2 204 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 C1GALT1C1Q96EU7 318 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 GINS4Q9BRT9 223 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 AKIRIN1Q9H9L7 192 aaPredicted RBP7.52□□□□□ -1.21
SPARC-201ENST00000231061 STEAP1Q9UHE8 339 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 PSORS1C1Q9UIG5 152 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 OSGIN1Q9UJX0 560 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 THSD7BQ9C0I4 1608 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 B4DXG7 233 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 M0R082 166 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 GFRA2O00451 464 aa7.52□□□□□ -1.21
SPARC-201ENST00000231061 CDC40O60508 579 aaKnown RBP eCLIP7.52□□□□□ -1.21
SPARC-201ENST00000231061 UCHL1P09936 223 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms