RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 BPIFCQ8NFQ6 507 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 OTOSQ8NHW6 89 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 SLC46A1Q96NT5 459 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 NRSN2Q9GZP1 204 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 CHST6Q9GZX3 395 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 HPF1Q9NWY4 346 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 TAS2R3Q9NYW6 316 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 RARRES3Q9UL19 164 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 HEATR5AQ86XA9 2040 aa18.41■□□□□ 0.54
SNX3-201ENST00000230085 H3BMH7 237 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 AQP2P41181 271 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 B2MP61769 119 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 PPIAP62937 165 aaKnown RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 MEF2DQ14814 521 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 ATPAF1Q5TC12 328 aaPredicted RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 C17orf107Q6ZR85 190 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 NDUFAF7Q7L592 441 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 STEAP2Q8NFT2 490 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 ADAMTS18Q8TE60 1221 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 OR8B4Q96RC9 309 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 TAAR9Q96RI9 348 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 INTS14Q96SY0 518 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 MSRB2Q9Y3D2 182 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 FRYQ5TBA9 3013 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 MED19A0JLT2 244 aaPredicted RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 MEGF11A6BM72 1044 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 C9orf172C9J069 976 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 PSMD9O00233 223 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 OR10H2O60403 315 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 FGF5P12034 268 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 IGFBP3P17936 291 aaPredicted RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 GALNSP34059 522 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 CTXN1P60606 82 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 DCDP81605 110 aaKnown RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 NAAAQ02083 359 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 GUCA2AQ02747 115 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 MELKQ14680 651 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 DCAF12Q5T6F0 453 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 ZNF813Q6ZN06 617 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 PGAP1Q75T13 922 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 OR2W3Q7Z3T1 314 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 LSRQ86X29 649 aaPredicted RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 ZDHHC22Q8N966 263 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 OR4N2Q8NGD1 307 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 OR5T3Q8NGG3 340 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 ARSGQ96EG1 525 aa18.4■□□□□ 0.54
SNX3-201ENST00000230085 ZNF587Q96SQ5 575 aaPredicted RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 MRTO4Q9UKD2 239 aaKnown RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 CARHSP1Q9Y2V2 147 aaKnown RBP18.4■□□□□ 0.54
SNX3-201ENST00000230085 SCN2AQ99250 2005 aa18.39■□□□□ 0.54
SNX3-201ENST00000230085 SEC16AO15027 2179 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 FAM74A7A6NL05 159 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 ELOA3DA6NLF2 546 aaPredicted RBP18.39■□□□□ 0.53
SNX3-201ENST00000230085 KDM4BO94953 1096 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 RENP00797 406 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 CT45A8P0DMV1 189 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 CT45A9P0DMV2 189 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 GRPRP30550 384 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 STARP49675 285 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 UBE2MP61081 183 aaKnown RBP18.39■□□□□ 0.53
SNX3-201ENST00000230085 DHRS2Q13268 280 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 SNTB1Q13884 538 aaKnown RBP18.39■□□□□ 0.53
SNX3-201ENST00000230085 RTP5Q14D33 572 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 PNLIPRP3Q17RR3 467 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 HFEQ30201 348 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 ELOA3BQ3SY89 546 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 FAM74A3Q4VXF1 159 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 CT45A2Q5DJT8 189 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 MESTQ5EB52 335 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 WDR38Q5JTN6 314 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 CSNK1A1LQ8N752 337 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 ELOA3Q8NG57 546 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 STK35Q8TDR2 534 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 RNF128Q8TEB7 428 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 ZNF285Q96NJ3 590 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 WDR13Q9H1Z4 485 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 TMEM100Q9NV29 134 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 NCOR2Q9Y618 2525 aa18.39■□□□□ 0.53
SNX3-201ENST00000230085 TRBV6-7A0A0A0MS04 114 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 LOC390937A0A1W2PQ73 354 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 F8VVB4 439 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 F8VWA3 439 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 H0YC42 278 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 AKR7A3O95154 331 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 RAB6AP20340 208 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 FUT7Q11130 342 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 SLC17A1Q14916 467 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.38■□□□□ 0.53
SNX3-201ENST00000230085 SLC25A42Q86VD7 318 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 SVBPQ8N300 66 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 RELL2Q8NC24 303 aaPredicted RBP18.38■□□□□ 0.53
SNX3-201ENST00000230085 OR10AC1Q8NH08 325 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 DOK4Q8TEW6 326 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 COMMD9Q9P000 198 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 FOXJ2Q9P0K8 574 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 IKZF2Q9UKS7 526 aa18.38■□□□□ 0.53
SNX3-201ENST00000230085 PQLC2LA1A4F0 135 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 TMEM218A2RU14 115 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 DCTN6O00399 190 aa18.37■□□□□ 0.53
SNX3-201ENST00000230085 ZNF28P17035 718 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms