RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 BPIFB2Q8N4F0 458 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 OR13C8Q8NGS7 320 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 OR1S1Q8NH92 325 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 DMRTA2Q96SC8 542 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 KCNK17Q96T54 332 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 IFT46Q9NQC8 304 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 NPIPA1Q9UND3 350 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 IGKV1D-43A0A0B4J1Z2 117 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 A0A1B0GTI1 187 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 WDPCPO95876 746 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 CD8AP01732 235 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 UBCP0CG48 685 aaKnown RBP14.54□□□□□ -0.08
LTBR-201ENST00000228918 ZNF28P17035 718 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 RAB6AP20340 208 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 DAP3P51398 398 aaKnown RBP14.54□□□□□ -0.08
LTBR-201ENST00000228918 STK11Q15831 433 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 PAPD4Q6PIY7 484 aaKnown RBP14.54□□□□□ -0.08
LTBR-201ENST00000228918 OR5M8Q8NGP6 311 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 ST8SIA1Q92185 356 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 ARL5BQ96KC2 179 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 DPYSL5Q9BPU6 564 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 CHRDQ9H2X0 955 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 CTSFQ9UBX1 484 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 GDF2Q9UK05 429 aaPredicted RBP14.54□□□□□ -0.08
LTBR-201ENST00000228918 SPAG17Q6Q759 2223 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 UNC13CQ8NB66 2214 aa14.54□□□□□ -0.08
LTBR-201ENST00000228918 ADAMTS20P59510 1910 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 ANKUB1A6NFN9 424 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 NPIPB13A6NJU9 1138 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 NPIPB4C9JG80 1138 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 P2RY10O00398 339 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 SPDEFO95238 335 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 FGF2P09038 288 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 RNF4P78317 190 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 DHRS2Q13268 280 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 OR7A5Q15622 319 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 CLVS2Q5SYC1 327 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 C16orf47Q6ZP98 133 aaPredicted RBP14.53□□□□□ -0.08
LTBR-201ENST00000228918 ACBD4Q8NC06 268 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 MFSD8Q8NHS3 518 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 AQP3Q92482 292 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 FOXRED1Q96CU9 486 aaPredicted RBP14.53□□□□□ -0.08
LTBR-201ENST00000228918 SLC6A7Q99884 636 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 ZNF230Q9UIE0 474 aaPredicted RBP14.53□□□□□ -0.08
LTBR-201ENST00000228918 FBXO4Q9UKT5 387 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 WIPF3A6NGB9 483 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 NXPH1P58417 271 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 POU3F1Q03052 451 aaPredicted RBP14.53□□□□□ -0.08
LTBR-201ENST00000228918 PHF19Q5T6S3 580 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 CORO6Q6QEF8 472 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 HSD17B13Q7Z5P4 300 aaPredicted RBP14.53□□□□□ -0.08
LTBR-201ENST00000228918 PLXDC1Q8IUK5 500 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 ZNF584Q8IVC4 421 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 PDZD9Q8IXQ8 264 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 BEST3Q8N1M1 668 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 LILRB1Q8NHL6 650 aaPredicted RBP14.53□□□□□ -0.08
LTBR-201ENST00000228918 RNF133Q8WVZ7 376 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 FBXL2Q9UKC9 423 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 FARSAQ9Y285 508 aaKnown RBP14.53□□□□□ -0.08
LTBR-201ENST00000228918 HRH3Q9Y5N1 445 aa14.53□□□□□ -0.08
LTBR-201ENST00000228918 IGHV3-20A0A0C4DH32 117 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 DUX1O43812 170 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 RLN2P04090 185 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 H2BFMP0C1H6 154 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 MMP16P51512 607 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 CAPZA1P52907 286 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 FOXL2P58012 376 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 SRSF4Q08170 494 aaKnown RBP14.52□□□□□ -0.08
LTBR-201ENST00000228918 SCGB2B2Q4G0G5 96 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 LPCAT3Q6P1A2 487 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 C17orf107Q6ZR85 190 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 SHISA6Q6ZSJ9 500 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 H1FNTQ75WM6 255 aaPredicted RBP14.52□□□□□ -0.08
LTBR-201ENST00000228918 BVESQ8NE79 360 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 PLPP5Q8NEB5 264 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 OR4S1Q8NGB4 309 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 MS4A7Q9GZW8 240 aaPredicted RBP14.52□□□□□ -0.08
LTBR-201ENST00000228918 MED29Q9NX70 200 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 SLC2A8Q9NY64 477 aa14.52□□□□□ -0.08
LTBR-201ENST00000228918 PHF3Q92576 2039 aaKnown RBP14.52□□□□□ -0.09
LTBR-201ENST00000228918 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 C2orf72A6NCS6 295 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 PCP4L1A6NKN8 68 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 DISC1C4P0D8 188 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 RAB27BO00194 218 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 CD34P28906 385 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 AGTR1P30556 359 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 HSF1Q00613 529 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 MEF2DQ14814 521 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 ZNF260Q3ZCT1 412 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 RAB12Q6IQ22 244 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 ZNF813Q6ZN06 617 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 CNTD2Q9H8S5 307 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 CHST11Q9NPF2 352 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 FAM206AQ9NX38 181 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 SEMA5BQ9P283 1151 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 SUSD2Q9UGT4 822 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 RAB22AQ9UL26 194 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 VSIG4Q9Y279 399 aa14.52□□□□□ -0.09
LTBR-201ENST00000228918 CPED1A4D0V7 1026 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms