RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 POU2F2P09086 479 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 MYOGP15173 224 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 MUC1P15941 1255 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 CAV2P51636 162 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 RIDAP52758 137 aaKnown RBP12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 SPOCK1Q08629 439 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 TSC22D1Q15714 1073 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 FAM109BQ6ICB4 259 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 OR52W1Q6IF63 320 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 OR4D6Q8NGJ1 314 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 OR10R2Q8NGX6 335 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 EGLN1Q9GZT9 426 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 RHOFQ9HBH0 211 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 EDARQ9UNE0 448 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 CLDN16Q9Y5I7 305 aa12.54□□□□□ -0.4
SCNN1A-201ENST00000228916 ZNF705EA8MWA4 302 aaPredicted RBP12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 C2orf74A8MZ97 194 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 SRSF10O75494 262 aaKnown RBP12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 APBB3O95704 486 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 SPARCP09486 303 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 AKR1C4P17516 323 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 ECH1Q13011 328 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 PEA15Q15121 130 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 SLC22A6Q4U2R8 563 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 KCTD18Q6PI47 426 aaPredicted RBP12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 TMPPEQ6ZT21 453 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 SFTPA2Q8IWL1 248 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 ELSPBP1Q96BH3 223 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 SMIM8Q96KF7 97 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 LRP12Q9Y561 859 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 A0A0J9YY10 115 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 C13orf42A0A1B0GVH6 325 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 METTL21EPA6NDL7 271 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 XKRYO14609 159 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 APODP05090 189 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 LYL1P12980 280 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 HRH1P35367 487 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 FUT7Q11130 342 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 ADAMTS17Q8TE56 1095 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 NUDCD2Q8WVJ2 157 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 KLHDC3Q9BQ90 382 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 OR10A5Q9H207 317 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 UBQLN4Q9NRR5 601 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 RAB22AQ9UL26 194 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 HHLA2Q9UM44 414 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 IGLV1-36A0A0B4J1U3 117 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 PRSS37A4D1T9 235 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 GDI1P31150 447 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 DNASE1L1P49184 302 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 RAB5BP61020 215 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 PPP1CAP62136 330 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 AWAT2Q6E213 333 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 MDGA2Q7Z553 956 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 NKAIN3Q8N8D7 197 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 ZNF615Q8N8J6 731 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 NANPQ8TBE9 248 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 ZNF775Q96BV0 537 aaPredicted RBP12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 SLC22A11Q9NSA0 550 aa12.53□□□□□ -0.4
SCNN1A-201ENST00000228916 MSGN1A6NI15 193 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 FARS2O95363 451 aaKnown RBP12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 S100A8P05109 93 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 TBPP20226 339 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 SNRPEP62304 92 aaKnown RBP12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 INSM1Q01101 510 aaPredicted RBP12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 NFATC4Q14934 902 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 OR13C3Q8NGS6 347 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 OR6S1Q8NH40 331 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 CMBLQ96DG6 245 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 DGAT2Q96PD7 388 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 CCDC3Q9BQI4 270 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 ADAM19Q9H013 955 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 S1PR5Q9H228 398 aa12.52□□□□□ -0.4
SCNN1A-201ENST00000228916 KIAA0100Q14667 2235 aaKnown RBP12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 ZNF264O43296 627 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 BGLAPP02818 100 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 ISG15P05161 165 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 KIR2DL1P43626 348 aaPredicted RBP12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 CENPAP49450 140 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 TAS2R31P59538 309 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 SGCAQ16586 387 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 MED25Q71SY5 747 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 HOGA1Q86XE5 327 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 ZNF519Q8TB69 540 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 OIT3Q8WWZ8 545 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 NKD1Q969G9 470 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 HRH4Q9H3N8 390 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 SEC61A2Q9H9S3 476 aa12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 MRPS33Q9Y291 106 aaKnown RBP12.52□□□□□ -0.41
SCNN1A-201ENST00000228916 C5orf52A6NGY3 159 aa12.51□□□□□ -0.41
SCNN1A-201ENST00000228916 PRKNO60260 465 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-201ENST00000228916 OR6A2O95222 327 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms