RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 PCDH15Q96QU1 1955 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 RTTNQ86VV8 2226 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 IGKV1D-43A0A0B4J1Z2 117 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 TTLL8A6PVC2 850 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 H0YIZ8 118 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 H7C2Y5 167 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 LINC01387J3KSC0 135 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 P2RY10O00398 339 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 TNFRSF10CO14798 259 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 PHYHO14832 338 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 EFSO43281 561 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 STK17BO94768 372 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 NUDT14O95848 222 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 IL2RAP01589 272 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 CXCR1P25024 350 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DNASE1L1P49184 302 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 RIDAP52758 137 aaKnown RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 RPL27P61353 136 aaKnown RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 TOMM20Q15388 145 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 RNASE10Q5GAN6 216 aaKnown RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 ZNF813Q6ZN06 617 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 OOSP2Q86WS3 158 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 CHST4Q8NCG5 386 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 PHOSPHO2Q8TCD6 241 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 ELP5Q8TE02 316 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 TMED6Q8WW62 240 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 TSLPQ969D9 159 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 PHYHIPLQ96FC7 376 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 PIK3IP1Q96FE7 263 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 RNF126Q9BV68 326 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 SLC7A5P2Q9GIP4 190 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 MTIF3Q9H2K0 278 aaKnown RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 MLXQ9UH92 298 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 MKL2Q9ULH7 1088 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 MRPS33Q9Y291 106 aaKnown RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 CSAG2Q9Y5P2 127 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 A0A0B4J2A0 478 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 A0A1B0GW55 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 MSGN1A6NI15 193 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 H0YIG0 161 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 LINC01565O15544 149 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 FGF16O43320 207 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 ZNF208O43345 1280 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 CD2P06729 351 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DUX4L2P0CJ85 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DUX4L3P0CJ86 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DUX4L4P0CJ87 422 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DUX4L5P0CJ88 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DUX4L6P0CJ89 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DUX4L7P0CJ90 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 NFYBP25208 207 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 TNFRSF4P43489 277 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 SCRN3Q0VDG4 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 BIKQ13323 160 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 LPCAT3Q6P1A2 487 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 HAGHLQ6PII5 290 aaPredicted RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 TMEM92Q6UXU6 159 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 TMEM200AQ86VY9 491 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 OR5T2Q8NGG2 359 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 OR52N4Q8NGI2 321 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 C2CD4CQ8TF44 421 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 ZNF587Q96SQ5 575 aaPredicted RBP11.09□□□□□ -0.63
NUP88-201ENST00000225696 CYTL1Q9NRR1 136 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 DUX4Q9UBX2 424 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 SHPKQ9UHJ6 478 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 FAM96BQ9Y3D0 163 aa11.09□□□□□ -0.63
NUP88-201ENST00000225696 B4DGG1 531 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 EIF1AYO14602 144 aaKnown RBP11.08□□□□□ -0.64
NUP88-201ENST00000225696 PMP2P02689 132 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 HLA-GP17693 338 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 FSTP19883 344 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 SERPINF1P36955 418 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 PPICP45877 212 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 ZNF528Q3MIS6 628 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 GTPBP8Q8N3Z3 284 aaPredicted RBP11.08□□□□□ -0.64
NUP88-201ENST00000225696 ZSCAN4Q8NAM6 433 aaPredicted RBP11.08□□□□□ -0.64
NUP88-201ENST00000225696 INO80EQ8NBZ0 244 aaPredicted RBP11.08□□□□□ -0.64
NUP88-201ENST00000225696 OR52N5Q8NH56 324 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 THAP6Q8TBB0 222 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 MARCH1Q8TCQ1 289 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 GPR119Q8TDV5 335 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 ASB12Q8WXK4 309 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 FGGYQ96C11 551 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 C12orf57Q99622 126 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 NICN1Q9BSH3 213 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 FOXQ1Q9C009 403 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 S1PR5Q9H228 398 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 SLCO5A1Q9H2Y9 848 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 ATG2AQ2TAZ0 1938 aa11.08□□□□□ -0.64
NUP88-201ENST00000225696 TRAV36DV7A0A075B6V5 113 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 C5orf51A6NDU8 294 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 TMEM200CA6NKL6 621 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 HSPB2A8KAH6 182 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 F8W036 122 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms