RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CDX2Q99626 313 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-201ENST00000219334 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-201ENST00000219334 TMEM129A0AVI4 362 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 FITM1A5D6W6 292 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 ANKUB1A6NFN9 424 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 CRYZL1O95825 349 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 PCK2Q16822 640 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 SIAH3Q8IW03 269 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 ARPC5LQ9BPX5 153 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 GPATCH2Q9NW75 528 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 SNAPINO95295 136 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 OR8G2PQ6IF36 304 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 GABRG1Q8N1C3 465 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 HINT3Q9NQE9 182 aaKnown RBP17.2■□□□□ 0.34
SMPD3-201ENST00000219334 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 MC2RQ01718 297 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 NUDT8Q8WV74 236 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 TPPP3Q9BW30 176 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 NAA50Q9GZZ1 169 aaKnown RBP17.2■□□□□ 0.34
SMPD3-201ENST00000219334 GALR2O43603 387 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-201ENST00000219334 PMS2P2O95744 297 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 UBE2G2P60604 165 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 CMTM4Q8IZR5 234 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 ZNF321PQ8N8H1 164 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 M0QZ24 198 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 KLK8O60259 260 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 M0R296 226 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 TNFRSF1AP19438 455 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 UBE2KP61086 200 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 CA5BP1Q8WTZ4 195 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 MRPS24Q96EL2 167 aaKnown RBP17.19■□□□□ 0.34
SMPD3-201ENST00000219334 TECTBQ96PL2 329 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 I6L893 689 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-201ENST00000219334 B4GALT3O60512 393 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 CALCBP10092 127 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 POU3F3P20264 500 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-201ENST00000219334 F2RP25116 425 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 PCSK6P29122 969 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 EPHA8P29322 1005 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-201ENST00000219334 RPS16P62249 146 aaKnown RBP17.19■□□□□ 0.34
SMPD3-201ENST00000219334 POU4F3Q15319 338 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 CDC20BQ86Y33 519 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 TMEM99Q8N816 258 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 TP53I13Q8NBR0 393 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-201ENST00000219334 WDR1O75083 606 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 IL9P15248 144 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 PPP3CBP16298 524 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 CSN1S1P47710 185 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 BTLAQ7Z6A9 289 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 FJX1Q86VR8 437 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 NANOGP1Q8N7R0 232 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 OR2AK2Q8NG84 335 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 ASB1Q9Y576 335 aa17.19■□□□□ 0.34
SMPD3-201ENST00000219334 DDX60Q8IY21 1712 aaKnown RBP17.19■□□□□ 0.34
SMPD3-201ENST00000219334 TNFSF14O43557 240 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 FOLR1P15328 257 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 EMDP50402 254 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 EGR3Q06889 387 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 FAM199XQ6PEV8 388 aaPredicted RBP17.18■□□□□ 0.34
SMPD3-201ENST00000219334 FAM26EQ8N5C1 309 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 DTWD2Q8NBA8 298 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 OR1J1Q8NGS3 322 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 TCRBP04435 133 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 CEACAM16Q2WEN9 425 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 WIPI1Q5MNZ9 446 aaPredicted RBP17.18■□□□□ 0.34
SMPD3-201ENST00000219334 NRARPQ7Z6K4 114 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 TMEM200AQ86VY9 491 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 SAV1Q9H4B6 383 aaPredicted RBP17.18■□□□□ 0.34
SMPD3-201ENST00000219334 ZC3H12DA2A288 527 aaKnown RBP17.18■□□□□ 0.34
SMPD3-201ENST00000219334 HMX2A2RU54 273 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 SLC38A9Q8NBW4 561 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 CLEC2LP0C7M8 214 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 SMIM21Q3B7S5 101 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 ELFN2Q5R3F8 820 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 C15orf54Q8N8G6 183 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 ARSGQ96EG1 525 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 CNRIP1Q96F85 164 aaPredicted RBP17.18■□□□□ 0.34
SMPD3-201ENST00000219334 FBXL4Q9UKA2 621 aa17.18■□□□□ 0.34
SMPD3-201ENST00000219334 TRABD2BA6NFA1 517 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 CCR9P51686 369 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 HCCSP53701 268 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 SLC23A1Q9UHI7 598 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 COPS3Q9UNS2 423 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 IGHV1OR15-9A0A0B4J2B8 117 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 HIST2H3PS2Q5TEC6 136 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 SSX9Q7RTT3 188 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 HSD17B11Q8NBQ5 300 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 COMMD5Q9GZQ3 224 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 SCPEP1Q9HB40 452 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 SMCO4Q9NRQ5 59 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 IGHV1OR21-1A0A087WYE8 117 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 OR2W5A6NFC9 320 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 CREB3L2Q70SY1 520 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 CRYBA1P05813 215 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 SSPNQ14714 243 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 TESK1Q15569 626 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 TMEM211Q6ICI0 200 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 ACSM5Q6NUN0 579 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 PPP1R3CQ9UQK1 317 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 HSPB2A8KAH6 182 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms