RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NMES1Q9C002 83 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 NKX2-4Q9H2Z4 354 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 OR51I2Q9H344 312 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 ERVMER34-1Q9H9K5 563 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 RNF186Q9NXI6 227 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 VDAC3Q9Y277 283 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 RPH3AQ9Y2J0 694 aaPredicted RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 KNTC1P50748 2209 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 RP1P56715 2156 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 LAMTOR5O43504 91 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 FRS3O43559 492 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 NDUFB6O95139 128 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 CD1AP06126 327 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 POU2F2P09086 479 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 ITGB8P26012 769 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 CHRNB4P30926 498 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 VIPR2P41587 438 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 PPICP45877 212 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 GPR3P46089 330 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 SUCLG1P53597 346 aaKnown RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 PNLIPRP2P54317 469 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 GAB1Q13480 694 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 EXOSC2Q13868 293 aaKnown RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 TIGITQ495A1 244 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 GLIPR1L1Q6UWM5 242 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 MOB3CQ70IA8 216 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 SLC35D2Q76EJ3 337 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 CDC20BQ86Y33 519 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 BAP18Q8IXM2 172 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 TAAR6Q96RI8 345 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 ACOXLQ9NUZ1 547 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 FTSJ1Q9UET6 329 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 A0A0A6YYC8 382 aaPredicted RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 LOC107986453A0A1B0GWG9 222 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 I3L1I5 382 aaPredicted RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 AGPAT2O15120 278 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 IFI6P09912 130 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 SMIM6P0DI80 62 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 PGGT1BP53609 377 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 FAM74A3Q4VXF1 159 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 RPUSD3Q6P087 351 aaKnown RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 FBXO46Q6PJ61 603 aaPredicted RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 IL20RBQ6UXL0 311 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 STAC2Q6ZMT1 411 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 AGBL5Q8NDL9 886 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 OR2AK2Q8NG84 335 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 OR52I2Q8NH67 350 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 UTP23Q9BRU9 249 aaKnown RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 MED20Q9H944 212 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 GCM1Q9NP62 436 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 AK3Q9UIJ7 227 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 KCND3Q9UK17 655 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 FBXL2Q9UKC9 423 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 GJD2Q9UKL4 321 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 TMED3Q9Y3Q3 217 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 YTHDF2Q9Y5A9 579 aaKnown RBP4.03□□□□□ -1.76
CHD9-201ENST00000219084 TIMM10BQ9Y5J6 103 aa4.03□□□□□ -1.76
CHD9-201ENST00000219084 ABCD4O14678 606 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ANGPTL7O43827 346 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FBXO24O75426 580 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 EIF4EP06730 217 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 GLB1P16278 677 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 GALNSP34059 522 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 RGRP47804 291 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CARD18P57730 90 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ERVFC1P60507 584 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FABP5Q01469 135 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 AKR1C1Q04828 323 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FXNQ16595 210 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 LYSMD4Q5XG99 296 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 H2BFWTQ7Z2G1 175 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 HSD17B13Q7Z5P4 300 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 LINC01599Q8WXQ3 324 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 MUCL1Q96DR8 90 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZNF251Q9BRH9 671 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TRAPPC2LQ9UL33 140 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 MYADML2A6NDP7 307 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 RAB27BO00194 218 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SLC17A2O00624 439 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 DVL1O14640 695 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 PRAMEF4O60810 478 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 CLDN1O95832 211 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 PMP2P02689 132 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 COX5AP20674 150 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 DVL1P1P54792 670 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 MRPL58Q14197 206 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZNF77Q15935 545 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 IGFBP7Q16270 282 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ZNF239Q16600 458 aaKnown RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 ISXQ2M1V0 245 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 C4orf17Q53FE4 359 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TOR2AQ5JU69 321 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 DCXRQ7Z4W1 244 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 SLC35G3Q8N808 338 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 DMBX1Q8NFW5 382 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 BAHD1Q8TBE0 780 aaPredicted RBP4.02□□□□□ -1.77
CHD9-201ENST00000219084 ABHD5Q8WTS1 349 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 ST8SIA2Q92186 375 aa4.02□□□□□ -1.77
CHD9-201ENST00000219084 FGF13Q92913 245 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms