RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 WDPCPO95876 746 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 IL2RAP01589 272 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 ZBTB25P24278 435 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 HSD11B1P28845 292 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 RAB30Q15771 203 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 MS4A18Q3C1V0 323 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 ZNF260Q3ZCT1 412 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 OR10K2Q6IF99 312 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 FAM122CQ6P4D5 195 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 CORO6Q6QEF8 472 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 ZNF813Q6ZN06 617 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 Q6ZS52 159 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 MOB3CQ70IA8 216 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 ACBD4Q8NC06 268 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 RNF133Q8WVZ7 376 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 ST8SIA1Q92185 356 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 KCNK17Q96T54 332 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 B3GNT4Q9C0J1 378 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 FBXO4Q9UKT5 387 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 NPIPA1Q9UND3 350 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 SZT2Q5T011 3432 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 RAB27BO00194 218 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 BPNT1O95861 308 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 CD38P28907 300 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 BDKRB2P30411 391 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 ARL4DP49703 201 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 C14orf28Q4W4Y0 310 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 OGFOD3Q6PK18 319 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 H1FNTQ75WM6 255 aaPredicted RBP11.89□□□□□ -0.51
SRP54-201ENST00000216774 TRAPPC6BQ86SZ2 158 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 FJX1Q86VR8 437 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
SRP54-201ENST00000216774 STPG2Q8N412 459 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 OR10K1Q8NGX5 313 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 OR1L3Q8NH93 324 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 MFSD8Q8NHS3 518 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 FAM46BQ96A09 425 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 NUDT16L1Q9BRJ7 211 aaKnown RBP11.89□□□□□ -0.51
SRP54-201ENST00000216774 UQCC2Q9BRT2 126 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
SRP54-201ENST00000216774 A0A1W2PR77 199 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 RHPN2P1A8MT19 583 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 LMO7DNF2Z398 122 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 EIF1AYO14602 144 aaKnown RBP11.88□□□□□ -0.51
SRP54-201ENST00000216774 ADAM10O14672 748 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 H2BFMP0C1H6 154 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 TBPP20226 339 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 CD27P26842 260 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 EIF1AXP47813 144 aaKnown RBP11.88□□□□□ -0.51
SRP54-201ENST00000216774 GSK3AP49840 483 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 CXADRP78310 365 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 FMODQ06828 376 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 C17orf107Q6ZR85 190 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 ACOT7LQ6ZUV0 252 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 RELL2Q8NC24 303 aaPredicted RBP11.88□□□□□ -0.51
SRP54-201ENST00000216774 OR4S1Q8NGB4 309 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 MITD1Q8WV92 249 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 AIFM2Q9BRQ8 373 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 VN1R1Q9GZP7 353 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 MS4A7Q9GZW8 240 aaPredicted RBP11.88□□□□□ -0.51
SRP54-201ENST00000216774 TMEM185BQ9H7F4 350 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 ZC4H2Q9NQZ6 224 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 MYEF2Q9P2K5 600 aaKnown RBP11.88□□□□□ -0.51
SRP54-201ENST00000216774 PLEKHA6Q9Y2H5 1048 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 CACNA1CQ13936 2221 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 ALPK2Q86TB3 2170 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 ANKUB1A6NFN9 424 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 TEX46H3BTG2 121 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 P2RY10O00398 339 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 LMX1BO60663 402 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 ZNF217O75362 1048 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 STARP49675 285 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 GPR85P60893 370 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 NKPD1Q17RQ9 610 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 DEFB133Q30KQ1 61 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 SYT13Q7L8C5 426 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 SLC22A24Q8N4F4 322 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 RLN3Q8WXF3 142 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 PHB2Q99623 299 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 VRK1Q99986 396 aaPredicted RBP11.88□□□□□ -0.51
SRP54-201ENST00000216774 BARX1Q9HBU1 254 aaPredicted RBP11.88□□□□□ -0.51
SRP54-201ENST00000216774 FAM206AQ9NX38 181 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
SRP54-201ENST00000216774 IGHV1OR15-9A0A0B4J2B8 117 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.87□□□□□ -0.51
SRP54-201ENST00000216774 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.87□□□□□ -0.51
SRP54-201ENST00000216774 WIPF3A6NGB9 483 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 IL11P20809 199 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 LTBRP36941 435 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 APOBEC1P41238 236 aaKnown RBP11.87□□□□□ -0.51
SRP54-201ENST00000216774 SUMO3P55854 103 aaPredicted RBP11.87□□□□□ -0.51
SRP54-201ENST00000216774 QRFPP83859 136 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 TAF13Q15543 124 aa11.87□□□□□ -0.51
SRP54-201ENST00000216774 HYAL4Q2M3T9 481 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms