RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 SULT1B1O43704 296 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 GSTZ1O43708 216 aaPredicted RBP15.38■□□□□ 0.05
VRK1-201ENST00000216639 CYTIPO60759 359 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 TTRP02766 147 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 ACSM4P0C7M7 580 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 IGFBP3P17936 291 aaPredicted RBP15.38■□□□□ 0.05
VRK1-201ENST00000216639 CLDN15P56746 228 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 RAB11BQ15907 218 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 IGF2-ASQ6U949 168 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 UBE2J2Q8N2K1 259 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 TRIM63Q969Q1 353 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 SLC25A38Q96DW6 304 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 ASCL3Q9NQ33 180 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 FAM86C1Q9NVL1 165 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 NCKAP5O14513 1909 aa15.38■□□□□ 0.05
VRK1-201ENST00000216639 A0A1B0GVI7 797 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 A6NL46 340 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 FAM166BA8MTA8 275 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 TPPPO94811 219 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 RFC3P40938 356 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 NBL1P41271 181 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 KIR2DL3P43628 341 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 MRPS34P82930 218 aaKnown RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 ATP1A1-AS1Q5TC04 95 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 GALNTL5Q7Z4T8 443 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 GPR137CQ8N3F9 429 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 MEIOBQ8N635 442 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 NKAIN3Q8N8D7 197 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 DUSP18Q8NEJ0 188 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 CHAC2Q8WUX2 184 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 HAVCR1Q96D42 359 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 ITPKCQ96DU7 683 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 MMP28Q9H239 520 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 PNRC2Q9NPJ4 139 aaKnown RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 PAQR5Q9NXK6 330 aaPredicted RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 BOLA2-SMG1P6H3BVE0 249 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 TFECO14948 347 aaPredicted RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 MAGEA5P43359 124 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 CX3CR1P49238 355 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 MEOX1P50221 254 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 PRKXP51817 358 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 MRPS10P82664 201 aaKnown RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 TMEM69Q5SWH9 247 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 AGAP6Q5VW22 663 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 LINGO2Q7L985 606 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 AKAP14Q86UN6 197 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 SERPINA12Q8IW75 414 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 TOMM5Q8N4H5 51 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 TMEM251Q8N6I4 163 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 ZNF283Q8N7M2 679 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 HPS1Q92902 700 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 NABP1Q96AH0 204 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 FOXRED1Q96CU9 486 aaPredicted RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 RNF121Q9H920 327 aa15.37■□□□□ 0.05
VRK1-201ENST00000216639 ZNF275Q9NSD4 429 aaPredicted RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 DDX28Q9NUL7 540 aaKnown RBP15.37■□□□□ 0.05
VRK1-201ENST00000216639 DOK2O60496 412 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 SYNGR4O95473 234 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 APOC1P02654 83 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 CTSSP25774 331 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 LHX2P50458 406 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 CAPZA1P52907 286 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 ZNF121P58317 390 aaPredicted RBP15.36■□□□□ 0.05
VRK1-201ENST00000216639 ARG2P78540 354 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 ENDOGQ14249 297 aaKnown RBP15.36■□□□□ 0.05
VRK1-201ENST00000216639 HYAL4Q2M3T9 481 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 FAM27BQ5VT28 67 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 KRT74Q7RTS7 529 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 CPT1CQ8TCG5 803 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 SMIM4Q8WVI0 70 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 YIPF5Q969M3 257 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 ZNF775Q96BV0 537 aaPredicted RBP15.36■□□□□ 0.05
VRK1-201ENST00000216639 CACNG2Q9Y698 323 aa15.36■□□□□ 0.05
VRK1-201ENST00000216639 LOC100289279A0A1B0GTE1 492 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 LANCL1O43813 399 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 GLSO94925 669 aaPredicted RBP15.35■□□□□ 0.05
VRK1-201ENST00000216639 CEACAM1P13688 526 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 MNDAP41218 407 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 RSBN1Q5VWQ0 802 aaPredicted RBP15.35■□□□□ 0.05
VRK1-201ENST00000216639 ASPHD2Q6ICH7 369 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 COMMD2Q86X83 199 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 IZUMO1Q8IYV9 350 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 PLPP7Q8NBV4 271 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 OR6M1Q8NGM8 313 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 HAS2Q92819 552 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 TMEM45BQ96B21 275 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 PHF21AQ96BD5 680 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 FAM3DQ96BQ1 224 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 ZNF845Q96IR2 970 aaPredicted RBP15.35■□□□□ 0.05
VRK1-201ENST00000216639 C7orf50Q9BRJ6 194 aaKnown RBP15.35■□□□□ 0.05
VRK1-201ENST00000216639 SLC17A5Q9NRA2 495 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 KNTC1P50748 2209 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 CACNA1CQ13936 2221 aa15.35■□□□□ 0.05
VRK1-201ENST00000216639 ACOT7O00154 380 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 ADRB1P08588 477 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 ITGA5P08648 1049 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 CELA3AP09093 270 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 CD3GP09693 182 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 ZNF708P17019 499 aa15.34■□□□□ 0.05
VRK1-201ENST00000216639 ZNF20P17024 532 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms