RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 OR51F2Q8NH61 342 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 CHAC2Q8WUX2 184 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 TMED6Q8WW62 240 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 OR4C12Q96R67 309 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 BCL9O00512 1426 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 AQP8O94778 261 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 COX5AP20674 150 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 HTR1FP30939 366 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 GPR85P60893 370 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 RHOBP62745 196 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 MISPQ8IVT2 679 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 TMEFF1Q8IYR6 380 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF629Q9UEG4 869 aaPredicted RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 PDCD11Q14690 1871 aaKnown RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 SOX15O60248 233 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 CST2P09228 141 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 PVRP15151 417 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 DCAF7P61962 342 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 TSPAN31Q12999 210 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 C11orf40Q8WZ69 217 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 TOE1Q96GM8 510 aaKnown RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 PXDNQ92626 1479 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 HTN1P15515 57 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 SELEP16581 610 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 SYPL1Q16563 259 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 NKAIN2Q5VXU1 208 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 RTL8AQ9BWD3 113 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 ONECUT1Q9UBC0 465 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 MMACHCQ9Y4U1 282 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 E5RGE8 158 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 DEDDO75618 318 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 PAPLNO95428 1278 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 RBP4P02753 201 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 FPR3P25089 353 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 OR3A1P47881 315 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 PCBP3P57721 371 aaKnown RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF816Q0VGE8 651 aaPredicted RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 PRTGQ2VWP7 1150 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 CD276Q5ZPR3 534 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 OR5M1Q8NGP8 315 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 LMAN1LQ9HAT1 526 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 NSG2Q9Y328 171 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 MEIKINA0A087WXM9 373 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 OR2F2O95006 317 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 MTNR1BP49286 362 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 OR2F1Q13607 317 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 TAZQ16635 292 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 PM20D1Q6GTS8 502 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF66Q6ZN08 573 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 TOX3O15405 576 aaPredicted RBP13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 TCN2P20062 427 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 KIR2DS4P43632 304 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 GAMTQ14353 236 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 KIR2DS1Q14954 304 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 ANKRD61A6NGH8 418 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 ORM1P02763 201 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 GLRA1P23415 457 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 ATP6V1FQ16864 119 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 ALKBH6Q3KRA9 238 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF385BQ569K4 471 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 YOD1Q5VVQ6 348 aaPredicted RBP13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 EXTL1Q92935 676 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 TNFRSF13CQ96RJ3 184 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 SLC17A4Q9Y2C5 497 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 KIR2DS5A0A0G2JLQ3 304 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 A0A0G2JNG1 304 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 G3V2L1 256 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 KIR2DS3K7RE56 304 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 CYR61O00622 381 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 DNPH1O43598 174 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 BCL6P41182 706 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 KIR2DS5Q14953 304 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 SPNS3Q6ZMD2 512 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 OLIG1Q8TAK6 271 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 FER1L6-AS2Q96M78 137 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 SLIT2O94813 1529 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 CLEC18AA5D8T8 446 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 HENMT1Q5T8I9 393 aaKnown RBP13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 C17orf78Q8N4C9 275 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 CLEC18CQ8NCF0 446 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 MISP3Q96FF7 219 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 MRPL37Q9BZE1 423 aaKnown RBP13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 EVA1AQ9H8M9 152 aa13.4□□□□□ -0.26
SPTLC2-201ENST00000216484 EN2P19622 333 aaPredicted RBP13.4□□□□□ -0.27
SPTLC2-201ENST00000216484 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.27
SPTLC2-201ENST00000216484 SRSF9Q13242 221 aaKnown RBP eCLIP13.4□□□□□ -0.27
SPTLC2-201ENST00000216484 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.27
SPTLC2-201ENST00000216484 NAT8BQ9UHF3 227 aa13.4□□□□□ -0.27
SPTLC2-201ENST00000216484 C5orf49A4QMS7 147 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 SIGLEC6O43699 453 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 EIF1BO60739 113 aaKnown RBP13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 NUDT3O95989 172 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 HNRNPA1P09651 372 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 CTXN2P0C2S0 81 aa13.39□□□□□ -0.27
SPTLC2-201ENST00000216484 TEKQ02763 1124 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms