RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 GAL3ST1Q99999 423 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 OSBPL10Q9BXB5 764 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 EGLN1Q9GZT9 426 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 POFUT1Q9H488 388 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 MSL2Q9HCI7 577 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 EMC7Q9NPA0 242 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 POLE4Q9NR33 117 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 USE1Q9NZ43 259 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 KLHL21Q9UJP4 597 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 PCDHB10Q9UN67 800 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 ADAM18Q9Y3Q7 739 aa12.71□□□□□ -0.37
UPK3A-201ENST00000216211 A0A0G2JMP0 313 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 A0A0X1KG70 313 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ISPDA4D126 451 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 MAGEA13PA6NCF6 341 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 C12orf71A8MTZ7 269 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 H3BSA7 217 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 CDC42EP2O14613 210 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ICMTO60725 284 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ADH4P08319 380 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ADRA2CP18825 462 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 RPL4P36578 427 aaKnown RBP12.7□□□□□ -0.38
UPK3A-201ENST00000216211 LIPAP38571 399 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 SLC9A3P48764 834 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ALDH3A2P51648 485 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ARHGDIAP52565 204 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ANKDD1AQ495B1 522 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 DCAF12L2Q5VW00 463 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 MBOAT2Q6ZWT7 520 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 TSEN54Q7Z6J9 526 aaKnown RBP12.7□□□□□ -0.38
UPK3A-201ENST00000216211 SYT9Q86SS6 491 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 RNF113BQ8IZP6 322 aaKnown RBP12.7□□□□□ -0.38
UPK3A-201ENST00000216211 OR4M2Q8NGB6 313 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 TFAP2CQ92754 450 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 Q96M85 177 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 RDH12Q96NR8 316 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 CYSLTR2Q9NS75 346 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 UBAP1Q9NZ09 502 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 ZDHHC8Q9ULC8 765 aa12.7□□□□□ -0.38
UPK3A-201ENST00000216211 TIMM8AO60220 97 aaPredicted RBP12.69□□□□□ -0.38
UPK3A-201ENST00000216211 ABHD16AO95870 558 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 ALPLP05186 524 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 CFPP27918 469 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 ACTG1P63261 375 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 LCN2P80188 198 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 PSG7Q13046 419 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 ZBED5Q49AG3 693 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 MESTQ5EB52 335 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 ARL9Q6T311 187 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 C1QL2Q7Z5L3 287 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 TMEM179BQ7Z7N9 219 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 RBM4BQ9BQ04 359 aaKnown RBP12.69□□□□□ -0.38
UPK3A-201ENST00000216211 RBM4Q9BWF3 364 aaKnown RBP12.69□□□□□ -0.38
UPK3A-201ENST00000216211 DCAF16Q9NXF7 216 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 SMPD3Q9NY59 655 aaPredicted RBP12.69□□□□□ -0.38
UPK3A-201ENST00000216211 VNN3Q9NY84 501 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 GRHPRQ9UBQ7 328 aa12.69□□□□□ -0.38
UPK3A-201ENST00000216211 CGGBP1Q9UFW8 167 aaPredicted RBP12.69□□□□□ -0.38
UPK3A-201ENST00000216211 NDRG4Q9ULP0 352 aaKnown RBP12.69□□□□□ -0.38
UPK3A-201ENST00000216211 H0YAE9 185 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 J3QLI3 93 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 XKRYO14609 159 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 SGCEO43556 437 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 DOK2O60496 412 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 E2F6O75461 281 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 CD55P08174 381 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 CD14P08571 375 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 COX5BP10606 129 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 HTR5AP47898 357 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 HILS1P60008 231 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 TNFAIP6P98066 277 aaPredicted RBP12.68□□□□□ -0.38
UPK3A-201ENST00000216211 SLC3A1Q07837 685 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 GK3PQ14409 553 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 SLC36A3Q495N2 470 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 ZMAT1Q5H9K5 638 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 OTPQ5XKR4 325 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 TMPRSS11FQ6ZWK6 438 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 FAM122BQ7Z309 247 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 PEG10Q86TG7 708 aaKnown RBP12.68□□□□□ -0.38
UPK3A-201ENST00000216211 DHRSXQ8N5I4 330 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 FAM46AQ96IP4 442 aaKnown RBP12.68□□□□□ -0.38
UPK3A-201ENST00000216211 DCLRE1CQ96SD1 692 aaKnown RBP12.68□□□□□ -0.38
UPK3A-201ENST00000216211 DIRC2Q96SL1 478 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 ADI1Q9BV57 179 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 ANKRD60Q9BZ19 345 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 REEP1Q9H902 201 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 NDUFAF4Q9P032 175 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 NPTNQ9Y639 398 aa12.68□□□□□ -0.38
UPK3A-201ENST00000216211 TEX13CA0A0J9YWL9 993 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 TRIM77I1YAP6 450 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 IMPA2O14732 288 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 LYNP07948 512 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 CTLA4P16410 223 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 GSTM3P21266 225 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 CAPGP40121 348 aa12.67□□□□□ -0.38
UPK3A-201ENST00000216211 ADARB1P78563 741 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms