RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TMEM185AQ8NFB2 350 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 HGDQ93099 445 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 S1PR5Q9H228 398 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 POLE3Q9NRF9 147 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 OR52A1Q9UKL2 312 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 SLC5A6Q9Y289 635 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 TRAV36DV7A0A075B6V5 113 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 F5H5K5 113 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 TPPPO94811 219 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 SGCAQ16586 387 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 EXOSC6Q5RKV6 272 aaKnown RBP13.5□□□□□ -0.25
EFNB1-201ENST00000204961 AWAT2Q6E213 333 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 KCTD18Q6PI47 426 aaPredicted RBP13.5□□□□□ -0.25
EFNB1-201ENST00000204961 HDDC2Q7Z4H3 204 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 CMIPQ8IY22 773 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 CNTD2Q9H8S5 307 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 ASF1BQ9NVP2 202 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
EFNB1-201ENST00000204961 A0A0B4J2A0 478 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 SYT7O43581 403 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 RAMP1O60894 148 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 KNG1P01042 644 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 HCKP08631 526 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 IL13RA1P78552 427 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 MRPS21P82921 87 aaKnown RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 GK2Q14410 553 aaPredicted RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 RNASE10Q5GAN6 216 aaKnown RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF704Q6ZNC4 412 aaPredicted RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 BHLHE23Q8NDY6 225 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 C7orf50Q9BRJ6 194 aaKnown RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 WWTR1Q9GZV5 400 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 CST11Q9H112 138 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 SHPKQ9UHJ6 478 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 HS3ST3A1Q9Y663 406 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 AUP1Q9Y679 476 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 TMEM14AQ9Y6G1 99 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ADAM10O14672 748 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 DHRS2Q13268 280 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ARFRP1Q13795 201 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 NUP54Q7Z3B4 507 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ANGPTL5Q86XS5 388 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 MARCH1Q8TCQ1 289 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 PPP1R1CQ8WVI7 109 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 OR5B2Q96R09 309 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 PRR14LQ5THK1 2151 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ROS1P08922 2347 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 C5orf63A6NC05 138 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 RER1O15258 196 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 PRAF2O60831 178 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF254O75437 659 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 BGLAPP02818 100 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 GIPP09681 153 aaPredicted RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 CFHR1Q03591 330 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 RASGEF1BQ0VAM2 473 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 PPP1R1AQ13522 171 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 EXD3Q8N9H8 876 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ZBTB8AQ96BR9 441 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 ADAT3Q96EY9 351 aaPredicted RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 LIN37Q96GY3 246 aaPredicted RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 SLC46A1Q96NT5 459 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 VRK1Q99986 396 aaPredicted RBP13.49□□□□□ -0.25
EFNB1-201ENST00000204961 REG4Q9BYZ8 158 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 HHLA2Q9UM44 414 aa13.49□□□□□ -0.25
EFNB1-201ENST00000204961 OR5H14A6NHG9 310 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 OR2AT4A6NND4 320 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 TIAF1O95411 115 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 CSF1P09603 554 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 SERTAD2Q14140 314 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 NHLRC3Q5JS37 347 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 ATPAF1Q5TC12 328 aaPredicted RBP13.48□□□□□ -0.25
EFNB1-201ENST00000204961 PDZD9Q8IXQ8 264 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 PAQR8Q8TEZ7 354 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 PCDHB16Q9NRJ7 776 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 NAP1L6A6NFF2 107 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 MFSD2BA6NFX1 497 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 ADAP1O75689 374 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 CELA2AP08217 269 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 DMWDQ09019 674 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 FOXF1Q12946 379 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 LCN10Q6JVE6 187 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 GKN2Q86XP6 184 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 TMEM104Q8NE00 496 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF416Q9BWM5 594 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 SMIM3Q9BZL3 60 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 ASH2LQ9UBL3 628 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 EML6Q6ZMW3 1958 aa13.48□□□□□ -0.25
EFNB1-201ENST00000204961 FAM221AA4D161 298 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 SLC17A2O00624 439 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 ERCC1P07992 297 aaPredicted RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 PGAM2P15259 253 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 HSD11B1P28845 292 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 DLSTP36957 453 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 CLVS2Q5SYC1 327 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF660Q6AZW8 331 aaPredicted RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 DAZLQ92904 295 aaKnown RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 ZNF768Q9H5H4 540 aaKnown RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 MPTX1A8MV57 137 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms